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DOI: 10.1055/s-2002-20051
© Georg Thieme Verlag Stuttgart · New York
Genetic Identification of Cinnamon (Cinnamomum spp.) Based on the trnL-trnF Chloroplast DNA
Publication History
February 8, 2001
May 24, 2001
Publication Date:
31 January 2002 (online)
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Abstract
Genetic identification among cinnamon species was studied by analyzing nucleotide sequences of chloroplast DNA from four species (Cinnamomum cassia, C. zeylanicum, C. burmannii and C. sieboldii). The two regions studied were the intergenic spacer region between the trnL 3’exon and trnF exon (trnL -trnF IGS) and the trnL intron region. We found nucleotide variation at one site in the trnL-trnF IGS, and at three sites in the trnL intron. With the sequence data from analysis of these regions, the four Cinnamomum species used in this study were correctly identified. Furthermore, single-strand conformation polymorphism (SSCP) analysis of PCR products from the trnL-trnF IGS and the trnL intron resulted in different SSCP band patterns among C. cassia, C. zeylanicum and C. burmannii.
References
-
1 Purseglove J W. Lauraceae, Dicotyledons 1.
In: Tropical Crops . Longmans, Green and Co. ltd Bristol; 1969: 187-92 -
2 Kostermans A JGH. Materials for a revision of Lauraceae.
In: Reinwardtia vol. 8 part 1 . Herbarium Bogoriense Bogor; 1970: 21-196 - 3 Nitta A. Studies on commercial cinnamon and allied bark. Yakugaku Zasshi. 1984; 104 261-74
- 4 Renner S S. Circumscription and phylogeny of the Laurales: evidence from molecular and morphological data. American Journal of Botany. 1999; 86 1301-15
- 5 Rohwer J G. Toward a phylogenetic classification of the Lauraceae. Systematic Botany. 2000; 25 60-71
- 6 Savolainen V, Chase M W, Morton C M, Hoot S B, Soltis D E, Bayer C, Fay M F, Bruijn A, Sullivan S, Qiu Y L. Phylogenetics of flowering plants based upon a combined analysis of plastid atpB and rbcL gene sequences. System Biology. 2000; 49 306-62
- 7 Neuhaus H, Ling G. The chloroplast tRNA Lys(UUU) gene from mustard (Sinapis alba) contains a class intron potentially coding for a maturase-related polypeptide. Current Genetics. 1987; 11 251-7
- 8 Gielly L, Taberlet P. The use of chloroplast DNA to resolve plant phylogenies: noncoding versus rbcL sequences. Molecular Biology and Evolution. 1994; 5 769-77
-
9 Rogers O S, Bendich J A. Extraction of DNA from plant tissues.
In: Plant Molecular Biology Mannual . Kluwer Academic Publishers Dordrecht; 1988: A6/1-11 - 10 Taberlet P, Gielly L, Pautou G, Bouvet J. Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Molecular Biology. 1991; 17 1105-9
- 11 Kohjyouma M, Lee I J, Iida O, Kurihara K, Yamada K, Makino Y, Sekita S, Satake M. Intraspecific variation in Cannabis sativa L. based on intergenic spacer region of chloroplast DNA. Biological Pharmaceutical Bulletin. 2000; 23 727-30
Mareshige Kojoma
Izu Experimental Station for Medical Plants
National Institute of Health Sciences
Shizuoka
Japan
Fax: +81-484-62-4674
Email: kojoma@postman.riken.go.jp