Subscribe to RSS
DOI: 10.1055/s-2003-41477
l-α-Methylhomoisoserine: A New Versatile Building Block for Peptide and Depsipeptide Modification [1]
Publication History
Publication Date:
19 September 2003 (online)

Abstract
An efficient access to l-α-methylhomoisoserine derivatives starting from l -citramalic acid is described. The new compounds are GABA derivatives and represent new, versatile building blocks for peptide and depsipeptide modification.
Keywords
citramalic acid - hexafluoroacetone - γ-amino-α-hydroxy-α-methylbutyric acid - Wolff rearrangement - Arndt-Eistert synthesis - Curtius rearrangement - amino acid hydroxamates
- Hexafluoroacetone as protecting and activating reagent in α-hydroxy acid chemistry, Part 4.
-
1a For Part 3, see:
Radics G.Pires R.Koksch B.El-Kousy SM.Burger K. Tetrahedron Lett. 2003, 44: 1059 -
1b Part 2:
Burger K.Böttcher C.Radics G.Hennig L. Tetrahedron Lett. 2001, 42: 3061 - 2
Soth MJ.Nowick JS. J. Org. Chem. 1999, 64: 276 ; and references cited therein -
3a
Seebach D.Matthews JL. Chem. Commun. 1997, 2015 -
3b
Seebach D.Matthews JL.Meden A.Wessel T.Baerlocher C.McCusker LB. Helv. Chim. Acta 1997, 80: 173 -
3c
Krauthäuser S.Christianson LA.Powell DR.Gellman SH. J. Am. Chem. Soc. 1997, 119: 11719 -
3d
Gellman SH. Acc. Chem. Res. 1998, 31: 173 -
3e
Banerjee A.Balaram P. Curr. Sci. 1997, 73: 1067 -
3f
Brenner M.Seebach D. Helv. Chim. Acta 2001, 84: 1181 -
3g
Seebach D.Sifferlen T.Bierbaum DJ.Rueping M.Jaun B.Schweizer B.Schaefer J.Mehta AK.O’Connor RD.Meyer BH.Ernst M.Glättli ?. Helv. Chim. Acta 2002, 85: 2877 -
3h
Gademann K.Häne A.Rueping M.Jaun B.Seebach D. Angew. Chem., Int. Ed. 2003, 42: 1534 -
4a
Woll MG.Lai JR.Guzei IA.Taylor SJC.Smith MEB.Gellman SH. J. Am. Chem. Soc. 2001, 123: 11077 -
4b
Karle IL.Pramanik A.Banerjee A.Bhattacharjya S.Balaram P. J. Am. Chem. Soc. 1997, 119: 9087 -
5a
Maji SK.Banerjee R.Velmurugan D.Razak A.Fun HK.Banerjee A. J. Org. Chem. 2002, 67: 633 ; and references cited therein -
5b
Hintermann T.Gademann K.Jaun B.Seebach D. Helv. Chim. Acta 1998, 81: 983 - 6
Frackenpohl J.Arvidsson PI.Schreiber JV.Seebach D. ChemBioChem. 2001, 2: 445 - 7
Hanessian S.Luo X.Schaum R.Michnick S. J. Am. Chem. Soc. 1998, 120: 8569 -
8a
Kondo S.Tamura A.Gomi S.Ikeda Y.Takeuchi T.Mitsuhashi S. J. Antibiot. 1993, 46: 310 -
8b
Kawaguchi H.Naito T. In Chronicles of Drug Discovery 2:Bindra JS.Lednicer D. J. Wiley & Sons; New York NY: 1983. p.207 -
8c
Kawasaki H.Naito T. J. Antibiot. 1972, 25: 895 -
8d
Woo WPK.Dion H.Bartz QR. Tetrahedron Lett. 1971, 36: 2617 - 9
Shioiri T.Hamada Y.Matsuura F. Tetrahedron 1995, 51: 3939 - 10
Harris K.Sih CJ. Biocatalysis 1992, 5: 195 -
11a
Iriuchijima S.Ogawa M. Synthesis 1982, 41 -
11b
Brehm L.Krogsgaard-Larsen P. Acta Chem. Scand. 1979, B33: 52 -
11c
Yoneta Y.Shibahara S.Fukatsu S.Seki S. Bull. Chem. Soc. Jpn. 1978, 51: 3296 -
11d
Horiuchi Y.Akita E.Ito T. Agric. Biol. Chem. 1976, 40: 1649 -
11e
Yamada Y.Okada H. Agric. Biol. Chem. 1976, 40: 1437 -
12a
Weygand F.Burger K. Chem. Ber. 1966, 99: 2880 -
12b
Pires R.Burger K. Synthesis 1996, 281 - 13
Burger K.Windeisen E.Heistracher E.Lange T.Abdel Aleem HAA. Monatsh. Chem. 2002, 133: 41 -
14a
Doyle MP.Mc Kervey MA. Chem. Commun. 1997, 983 -
14b
Meier H.Zeller K.-P. Angew. Chem., Int. Ed. Engl. 1974, 14: 32 -
14c
Guibourdenche C.Seebach D.Natt F. Helv. Chim. Acta 1997, 80: 1 -
14d
Leggio A.Ligouri A.Procopio A.Sindona G. J. Chem. Soc., Perkin Trans. 1 1997, 1969 - 15
Sheradsky T. In The Chemistry of the Azido GroupPatai S. Interscience Publishers, Wiley & Sons; Chichester: 1971. p.341 -
18a
(2 S)-4- tert -Butyloxycarbonylamino-2-hydroxy-2-methyl-butanoic acid methyl ester (10a): A solution of 9a (200 mg, 0.52 mmol) in dry MeOH (15 mL) was heated for 72 h. When the reaction was complete (TLC control), the solvent was evaporated in vacuo and the remaining residue purified by column chromatography (eluent: CHCl3-MeOH, 20:1, Rf = 0.32). Yield: 0.63 mg (49%) 9a, colorless oil; [a]D = -4.2 (c 0.48, MeOH). 1H NMR (CDCl3): d = 1.35 (s, 3 H, CH3), 1.36 [s, 9 H, C(CH3)3], 1.74 (m, 1 H, CH2CH2), 2.01 (m, 1 H, CH2CH2), 2.97 (s, 1 H, OH), 3.10 (m, 1 H, NCH2), 3.20 (m, 1 H, NCH2), 3.72 (s, 3 H, OCH3), 4.83 (br s, 1 H, NH). 13C NMR (CDCl3): d = 26.60, 28.36, 36.21, 39.15, 52.89, 74.75, 83.39, 155.97, 177.48. MS (ESI): m/z = 270.13119 [M + Na]+ 270.13144, calcd: 270.13119; [2 M + Na]+ 517.27351, calcd: 517.27317.
-
18b
(2S)-4- tert- Butyloxycarbonylamino-2-hydroxy-2-methyl-butan-hydroxamate ( 10b): To a stirred solution of 9a (200 mg, 0.52 mmol) in DMF, HCl·NH2OH (40 mg, 0.58 mmol) and propylene oxide (34 mg, 0.58 mmol) were added. After 24 h the reaction was complete (TLC control). The solvent was evaporated in vacuo and the residue purified by column chromatography (eluent: CHCl3-MeOH 10:1, Rf = 0.11). Yield: 88 mg (67%) 10b, white hygroscopic solid; [α]D = -3.0 (c 0.5, MeOH). 1H NMR (DMSO-d 6): δ = 1.22 (s, 3 H, CH3), 1.35 [s, 9 H, C(CH3)3], 1.56 [m, 1 H, CH2CH2], 1.75 (m, 1 H, CH2CH2), 2.83 (m, 1 H, NCH2), 3.01 (m, 1 H, NCH2), 5.14 (s, 1 H, OH), 6.59 (br s, 1 H, NH), 8.59 (br s, 1 H, NHOH), 10.29 (br s, 1 H, NHOH). 13C NMR (DMSO-d 6): δ = 26.42, 28.16, 35.65, 39.90, 73.18, 77.27, 155.33, 171.67. MS (ESI): m/z = [M + Na]+ 271.12670; calcd 271.12644; [2 M + Na]+ 519.26389; calcd 519.26366.
- 19
Vasanthakumar G.-R.Suresh Babu VV. Tetrahedron Lett. 2003, 44: 4099 ; and references cited therein -
20a
Murahashi D.Oda T.Sugahara S.Masui Y. J. Org. Chem. 1990, 50: 1744 -
20b
Burke TR.Fesen MR.Mazumder A.Wang J.Carothers AM.Grunberger D.Drisscoll J.Kohn K.Pommier Y. Med. Chem. 1995, 38: 4171 -
21a
Bourdel E.Doulut S.Jerretou G.Labbe-Jullie C.Fehrentz J.-A.Doumbia D.Kitabgi P.Martinez J. Int. J. Peptide Protein Res. 1996, 48: 148 -
21b
Pirrung MC.Cao J.Chen J. J. Org. Chem. 1995, 60: 5790 - 22
Johnson JE.Springfield JR.Hwang JS.Haynes LJ.Cunningham WC.Mc Claugherty DL. Tetrahedron Lett. 1971, 36: 284 - 23
Burger K.Schedel H.Spengler J. Amino Acids 1999, 16: 287 - 24
Pumpor K.Windeisen E.Burger K. Heterocycl. Chem. 2003, 40: 329 - 27
Böttcher C.Burger K. Tetrahedron Lett. 2003, 44: 4223
References
(
5S
)-5-(2-Isocyanatoethyl)-5-methyl-2,2-bis(trifluoro-methyl)-1,3-dioxolan-4-one (
8): To a solution of acid chloride 7 (3.94 g, 11.98 mmol) in anhyd toluene (20 mL) trimethylsilyl azide (1.52 g, 13.18 mmol) was added with stirring, then the reaction mixture was heated (85 °C, bath temperature). After 12 h the reaction was complete (19F NMR analysis), the solvent was evaporated in vacuo and the residue distilled under reduced pressure. Yield: 2.59 g (70%) 8, yellow oil, bp 34-38 °C/0.34 mbar; [α]D = -6.8 (c 1.33, CH2Cl2). 1H NMR (CDCl3): δ = 1.66 (s, 3 H, CH3), 2.17 (br t, 2 H, 3
J = 7 Hz, NHCH2CH
2
), 3.59 (m, 2 H, NHCH
2
). 13C NMR (CDCl3): δ = 22.33, 37.38 38.54, 80.59, 97.37 (sept.,
J = 35.9 Hz), 119.32 (q, J = 288.0 Hz), 122.83, 169.87.
19F NMR (CDCl3): δ = -81.14 (m, 6 F, 2 × CF3). MS (EI): m/z (%) = 307 [M]+(3), 238 (28), 169 (14), 72 (66), 56 (100).
(
5S
)
-
5-(2-
tert-
Butyloxycarbonylamino)ethyl-5-methyl-2,2-bis(trifluoromethyl)-1,3-dioxolan-4-one (
9a): A solution of 8 1.0 g (3.25 mmol) in t-BuOH(5 mL) was heated (60 °C, bath temperature) for 3 h. After evaporation of the solvent the residue was purified by column chromatography (eluent: CH2Cl2, Rf = 0.11). Yield: 868 mg (70%) 9a, mp 49-51 °C; [α]D = -4.0 (c 1, CH2Cl2). 1H NMR (CDCl3): δ = 1.43 (s, 9 H, C(CH3)3), 1.65 (s, 3 H, CH3), 2.07 (m, 2 H, CH2), 3.29 (m, 1 H, NCH2), 3.44 (m, 1 H, NCH2), 4.70 (m, 1 H, NH). 13C NMR (CDCl3): δ = 22.02, 28.35, 35.11, 37.48, 79.77, 81.13, 97.08 (sept., J = 35.7 Hz), 119.16 (q, J = 288.5 Hz), 155.72, 170.22.
19F NMR (CDCl3): δ = -81.23 (m, 6 F, 2 × CF3). MS (EI) m/z (%) = 381 [M]+ (2), 367 (5), 328 (16), 282 (14), 59 (93), 57 (100).
9b: A solution of 8 (2.0 g, 6.51 mmol) and benzyl alcohol (739 mg, 6.84 mmol) in anhyd CHCl3 (10 mL) was heated under reflux for 12 h. Purification: column chromatography (eluent: CH2Cl2, Rf = 0.32). Yield: 2.01 g (74%) 9b, colorless oil.
9c: A solution of 8 (2.0 g, 6.51 mmol) and 9-fluorenylmethanol (1.34 g, 6.84 mmol) in CHCl3 (10 mL) was heated under reflux for 12 h. Purification: column chromatography (eluent: CH2Cl2, Rf = 0.30). Yield: 3.50 g (76%) 9c, mp 75-78 °C.
[(2S)-4-(9-Fluorenylmethyl)oxycarbonylamino-2-hydroxy-2-methyl-butyryl]-phenylalanine tert- butyl ester ( 11b): To a stirred solution of 9c (200 mg, 0.40 mmol) in DMF (2 mL) HCl·NH2-Phe-Ot-Bu (123 mg, 0.48 mmol) and propylene oxide (28 mg, 0.48 mmol) were added. After 48 h at 30-40 °C the reaction was complete (TCL control). The solvent was evaporated in vacuo and the residue was purified by column chromatography (eluent: CHCl3-MeOH 10:1, Rf = 0.36). Yield: 56% (124 mg) 11b; mp 129 °C; [α]D = -4 (c 0.75, MeOH). 1H NMR (DMSO-d 6): δ = 1.30 (s, 3 H, CH3), 1.34 (s, 9 H, C(CH3)3), 1.58 (m, 1 H, CH2), 1.79 (m, 1 H, CH2), 2.77 (m, 1 H, NCH2), 3.02 (m, 3 H, NCH2, CH2-Phe), 4.20 (t, 3 J = 6.8 Hz, 1 H, CH), 4.26 (d, 3 J = 6.8 Hz, 2 H, CH2-Fmoc), 4.41 (dt, 3 J = 7.2 Hz, 3 J = 7.1 Hz, 1 H, CH-Phe), 5.46 (br s, 1 H, OH), 7.07 (br t, 3 J = 5.0 Hz, 1 H, NH), 7.14-7.29 (m, 5 H, H-Ar), 7.64 (d, 3 J = 9.0 Hz, 1 H, NH), 7.32-7.88 (m, 8 H, H-Fmoc). 13C NMR (DMSO-d 6): δ = 27.44, 27.48, 35.88, 36.69, 39.67, 46.64, 53.18, 65.12, 79.68, 80.84, 119.98, 125.03, 126.36, 126.91, 127.47, 128.03, 129.08, 136.92, 140.60. 143.80, 155.77, 170.12, 174.82. MS (ESI) m/z = [M + H]+ 559.28079, calcd.: 559.28026; [M + Na]+ 581.26252, calcd: 581.26221; [2 M + Na]+ 1139.53588, calcd: 1139.53520.
26[(2S)-4-(9-Fluorenylmethyl)oxycarbonylamino-2-hydroxy-2-methyl-butyryl]-azaglycine methyl ester ( 12b): To a stirred solution of 9c (200 mg, 0.40 mmol) in DMF (2 mL) NH2NHCO2Me (36 mg, 0.40 mmol) was added. After 24 h the reaction was complete (TLC control). DMF was evaporated in vacuo and the residue was purified by column chromatography (eluent: CHCl3-MeOH 10:1, Rf = 0.38) and then lyophilized. Yield: 87% (147 mg) 12b; mp 75-77 °C; [α]D = -3 (c 1.0, MeOH). 1H NMR (DMSO-d 6): δ = 1.26 (s, 3 H, CH3), 1.63 (m, 1 H, CH2), 1.84 (m, 1 H, CH2), 2.99 (m, 1 H, NCH2), 3.19 (m, 1 H, NCH2), 3.57 (s, 3 H, OCH3), 4.21 (m, 3 H, CH, CH2-Fmoc), 5.48 (br s, 1 H, OH), 5.54 (br s, 1 H, OH), 7.16 (br s, 1 H, NH), 7.32-7.87 (m, 8 H, Aryl-H Fmoc), 8.95 (br s, 1 H, NH), 9.46 (br s, 1 H, NH). 13C NMR (DMSO-d 6): δ = 26.42, 35.80, 40.12, 46.64, 51.68, 65.17, 73.25, 119.90, 125.08, 126.94, 127.48, 140.60, 143.83, 155.85, 156.47, 174.77. MS (ESI) m/z = [M + Na]+ 450.16395, calcd 450.16356; [2 M + Na]+ 877.33696, calcd: 877.33789.