Key words breast cancer - metastasis - PRAEGNANT - mutation - biomarker - prognosis
Schlüsselwörter Brustkrebs - Metastasen - PRAEGNANT - Mutation - Biomarker - Prognose
Introduction
As our understanding of breast cancer grows, it has become increasingly clear that
it is possible not just to plan and assess the choice of therapy for patients with
breast cancer but also the course of therapy using molecular and cellular tests [1 ]. Some therapies already treat patients based on the patientʼs specific genetic mutations
and amplifications or gene expression patterns. However, most of these therapies are
still being carried out in the context of research or clinical studies.
But new therapies for established patient and tumor characteristics are also emerging,
with specific therapies developed for and aimed at particular subgroups of patients.
The two most well-known examples of this are hormone therapy and anti-HER2 therapy.
The clinical and scientific basis of this approach are outlined below. The focus is
on breast cancer patients with metastatic disease. The research and care initiative
PRAEGNANT will also be described. This initiative aims to create a basis which will
make this type of medicine available to patients with metastatic breast cancer and
their physicians even outside clinical studies.
Prognostic and Predictive Factors in Metastatic Breast Cancer
Prognostic and Predictive Factors in Metastatic Breast Cancer
The PRAEGNANT study program focuses on patients with advanced, incurable, metastatic
breast cancer. There are a few clinical factors which could have a prognostic significance
for patients with metastatic breast cancer, even if they are not yet used much in
routine clinical practice. In routine practice, decisions on therapy tend to focus
more on the overall clinical picture, the severity of symptoms according to the patientʼs
subjective assessment, and the subjective assessment of how rapid remission needs
to be.
Factors described in some studies as prognostic factors for breast cancer patients
with metastatic disease include age, tumor mass, grading, time from primary diagnosis
to metastasis, and the site of metastasis [2 ]. Molecular factors have also been associated with prognosis. Most studies have focused
on the prognostic characteristics of the primary tumor and the prognosis for the patient
after metastasis. Hormone receptor status, HER2 status and Ki-67 are the most commonly
investigated parameters [3 ]. However, tumor characteristics are known to change during the course of disease
[4 ], [5 ], [6 ], [7 ], [8 ], [9 ], [10 ], [11 ], and the recommendation to carry out bioptic evaluation of metastases to determine
their molecular characteristics has therefore been included in national therapy recommendations
[12 ]. But although obtaining tumor tissue from the breast is relatively uncomplicated,
for practical reasons and to avoid complications physicians often object to taking
biopsies of metastatic tissue. One of the aims of the PRAEGNANT study program is to
carry out molecular tests in the setting of metastatic disease and to develop evaluation
methods which can be carried out without requiring biopsies of metastatic tissue,
for example by testing the patientʼs blood. Circulating tumor cells, circulating nucleic
acids or other biomarkers could be used for this type of analysis.
Molecular Patterns in Breast Cancer
Molecular Patterns in Breast Cancer
Most of the current understanding of molecular patterns in breast cancer was gained
from patients with primary breast cancer without metastatic disease. Most of the biomarkers
listed below therefore refer to primary breast cancer.
As our knowledge of the human genome increases and the cost of genome-wide analysis
decreases, the relationships between genetics, epigenetics, gene expression and protein
functions are becoming clearer. The existence of molecular subgroups for breast cancer
types and their prognostic relevance based on mRNA measurements were already discussed
in the literature more than 10 years ago [13 ], [14 ], [15 ]. One classification differentiates between basal, luminal A, luminal B and HER2-enriched
breast cancer subtypes. An attempt was subsequently made to classify these molecular
subtypes using known histopathological characteristics [16 ], [17 ], [18 ], [19 ]. Triple negative tumors (ER negative, PgR negative and HER2 negative) were found
to most closely resemble basal tumors. Slow-proliferating (e.g. Ki-67 < 14 %) and
hormone receptor-positive tumors generally correspond to luminal A tumors, while hormone
receptor-positive tumors with high proliferation rates (e.g. Ki-67 > 14 %) are most
closely correlated with luminal B tumors [20 ], [21 ], [22 ]. These cut-offs mirror the biological subtypes. However, other cut-offs (for example
20 %) are also being discussed in clinical practice [23 ].
The Human Genome Project and the publication of the human genome sequence [24 ], [25 ], [26 ] has created the basis for modern genome-wide analysis at various levels of systems
biology. The biological interrelationships behind various diseases are gradually being
– at least partially – uncovered. One of the next challenges in breast cancer research
will be to obtain an understanding of why there are different patterns of breast cancer
expression and why these may change during the course of disease. Genetic tumor factors
probably play a role as could epigenetic patterns, micro-RNA and other, still unknown
regulation mechanisms. Hereditary factors such as BRCA mutation or low-penetrance genetic variants are also known to affect gene expression
in tumors [27 ].
Genetic Factors
Various genetic germline mutations and somatic genetic mutations have been associated
with tumor biology and the prognosis of breast cancers. Both mutations and structural
and numerical changes to the tumor genome and germline genome could be relevant for
the tumor biology of breast cancer.
Mutations during pathogenesis
Genetic tumor mutations have already been investigated by comparing mutations to unchanged
DNA. The most extensive investigation in this context was the Cancer Genome Atlas
(TCGA) [28 ]. In the TCGA the genetic information of unchanged reference DNA was compared to
the DNA of breast cancer tumors. This resulted in the identification of the most common
mutations occurring in breast cancer. The most common gene mutations in breast cancer
found in the TCGA investigations were TP53, PIK3CA, GATA3, MAP3K1, MLL3, CDH1, MAP2K4, RUNX1, PTEN and others.
These initial investigations have already shown clear differences in mutation frequencies
between different molecular subtypes classified according to their level of gene expression.
Thus, a PI3K mutation was found in 32–49 % of cases with luminal (A and B) and HER2-positive breast
cancer but only in 7 % of cases with basal-like tumors [28 ]. This explains the current development of PI3K inhibitor drugs which focus on hormone
receptor-positive and HER2-positive disease.
Changes in the number of gene copies
Another genetic tumor change can consist of an increase or decrease in the number
of gene copies. In a large investigation carried out as part of the METABRIC study,
the number of gene copies and the associated gene expressions were determined for
every gene [29 ]. This allowed positions to be identified in the genome where changes in gene copy
numbers and an associated change in gene expression occurred most commonly. Genes
in which such changes occurred include ZNF703, PTEN, MYC, CCND1, MDM2, ERBB2, CCNE1, MDM1, MDM4, CDK3, CDK4, CAMK1D, PI4KB and NCOR1 (amplifications) and PPP2R2A, MTAP und MAP2K4 (deletions). The strongest association was found between amplification in the genes
HER2 (ERBB2) and cyclin D1 (CCND1) .
Genetic variants as prognostic or predictive factors
Some studies have tried to link the most common mutations listed above and gene copy
alterations to prognosis, in other words, to link prognosis to these new biomarkers.
Gene copy alterations and the associated changes in gene expression could be used
to improve the evaluation of prognosis for known molecular subgroups [29 ]. But with the exception of HER2 , none of these loci have been found to have any clinical relevance for prognostic
evaluation or therapy planning.
With regard to mutations, it was found that mutations in PI3K are associated with a poorer response to anti-HER2 therapy in patients with HER2-positive
tumors. Only 19.4 % of patients with PI3K mutation had complete pathological remission compared to 32.8 % of cases without
mutation in this gene [30 ]. Nevertheless, mutation in PI3K was not found to be correlated to a different prognosis [30 ]. Similarly, no association between prognosis and mutations and amplifications was
found in patients treated with the mTOR inhibitor everolimus [31 ].
Some genes whose mutation affects the efficacy of neoadjuvant aromatase inhibitor
therapy have been identified (MAP3K1, PIK3CA, TP53, GATA3, CDH1, TBX3, ATR, RUNX1 and others), [32 ]. Considerable overlap was found between these genes and the genes described by the
Cancer Genome Atlas [28 ], [32 ].
A large-scale analysis of mutations in 83 genes done in a large population of hormone
receptor-positive patients (n = 632) has provided more insight into the importance
of mutations as prognostic markers [33 ]. The 83 genes were selected based on previous studies [28 ], [32 ], [34 ] and sequenced in the patient population. In this analysis, mutation in the DDR1 (discoidin domain receptor tyrosine kinase 1) gene [33 ] was found to be correlated with prognosis.
It remains to be seen whether and which genes could be used as prognostic and predictive
parameters based on their genetic alterations. [Table 1 ] presents a number of such genes previously described in the literature [28 ], [32 ], [34 ].
Table 1 Genes whose mutations could potentially play a role in the pathogenesis or prognosis
of breast cancer or affect the therapeutic efficacy of breast cancer treatment [28 ], [32 ], [34 ].
AFF2
CREBBP
JAK2
NCOR1
PTPN22
USH2A
AGTR2
CSF1R
KIT
NCOR2
PTPRD
XBP1
AKT1
CTCF
KRAS
NF1
RB1
AKT2
DCAF4L2
LCLAT1
NOTCH4
RB1CC1
AKT3
DDR1
LTK
NRAS
RELN
ARID1A
EGFR
LYN
OR4N4
RERG
ARID1B
ERBB2
MAGI3
OR6A2
RPGR
ATM
ERBB3
MALAT1
PAPSS2
RRM2
ATR
ERBB4
MAN2A2
PDGFRA
RUNX1
AURKA
ESR1
MAP2K4
PGM2
RYR2
BIRC6
FBXW7
MDM2
PIK3CA
SEPT13
BRAF
FOXA1
MDM4
PIK3R1
SF3B1
BRCA1
FOXC1
MED12
PIN1
SMARCD1
BRCA2
FRG1B
MET
PLD1
SMG1
CASP8
FZD7
MLL
POLR1A
TAB1
CAV1
GATA3
MLL2
PPP2R2A
TAB2
CBFB
GPR32
MLL3
PRKCZ
TBL1XR1
CCND3
HEXA
MTAP
PRKDC
TBX3
CDH1
HMGCS2
MTPR
PRKX
TGFB1
CDKN1B
IDH3B
MYBB
PRLR
TGFB2
CLCA1
INSRR
MYBL2
PRPS2
TP53
CLEC19A
JAK1
NCOA3
PTEN
TPH2
Significance of genetic germline variants
In addition to somatic variants, the relevance of hereditary germline mutations and
variants for the prognosis of breast cancer are also being discussed.
A patientʼs genetic heredity can be associated with a specific molecular breast cancer
subtype. The most famous examples of this are patients with the BRCA1 mutation. If a patient with the BRCA1 mutation develops breast cancer, the probability that this cancer will be triple
negative is more than 50 % [27 ], [35 ], [36 ]. Other low-penetrance genetic variants reported in the literature were also found
to be associated with a specific molecular subtype [37 ], [38 ], [39 ], [40 ], [41 ], [42 ], [43 ], [44 ], [45 ]. Some of them are similar to BRCA1 and BRCA2 in that they play important roles in both breast cancer and ovarian cancer [46 ], [47 ], [48 ]. Unsurprisingly, genetic variants have also been associated with prognosis and the
overall survival of breast cancer patients [49 ], [50 ], [51 ], [52 ]. The causes can be so wide-ranging that even the detection of breast cancer can
be associated with breast cancer progression. Risk genes associated with the molecular
biology of breast cancer are directly linked to mammographic density and thus to the
probability of being detected sooner or later on mammography screening [53 ], [54 ], [55 ], [56 ], [57 ], [58 ].
Another reason could be that genetic variance is accociated with a change of drug
efficacy. For a time, the discussion focused on whether CYP2D6 genotyping could identify patients in whom tamoxifen therapy would have only limited
efficacy because the drug is not metabolized into its active metabolite. However,
different studies came to contradictory results, and this approach was therefore not
introduced into clinical practice [59 ], [60 ], [61 ], [62 ].
Some studies are currently actively recruiting participants to investigate the efficacy
of PARP inhibition in patients with BRCA1 or BRCA2 mutation [63 ], [64 ], [65 ] ([Table 2 ]). This type of study presents new challenges because the therapies can only be made
available to a small number of clearly defined patients.
Table 2 Breast cancer studies which have integrated molecular tests in their study design
or use them as predictors for the primary study goal (* relevant for therapy or study
means that the results of biomarker tests affected the choice of therapy or the study
design over and above stratification or subgroup analysis; ** in some of these studies,
inoperable locally advanced disease was sufficient for inclusion in the study).
Study name
Test
Test results relevant for therapy or study*
Drug
Therapy setting
BRIGHTNESS (NCT02032277)
germline DNA testing for BRCA1/2 mutation
veliparib
neoadjuvant
Olympia (NCT02032823)
germline DNA testing for BRCA1/2 mutation
X
olaparib
adjuvant/post-neoadjuvant
EMBRACA (NCT01945775)
germline DNA testing for BRCA1/2 mutation
X
talazoparib
1st–3rd line metastasized**
ABRAZO (NCT02034916)
germline DNA testing for BRCA1/2 mutation
X
talazoparib
4th+ line metastasized**
Neoadjuvant BYL719 vs. BKM120 Study (NCT01923168)
tumor PI3K testing
X
buparlisib (BKM120)/alpelisib (BYL719)
neodjuvant
PRESENT (NCT01479244)
HLA testing/HER2 testing
X
nelipepimut-S
adjuvant
DETECT III/IV (NCT01619111)
measurement of HER2 and ER expression in CTCs
X
lapatinib, everolimus, eribulin
FERGI (NCT01437566)
tumor PI3K testing
pictilisib
metastasized**
BT062 (EudraCT No. 2013–003 252–20)
TNBC, CD138 expression
X
indatuximab, ravtansine
metastasized
Belle 2/3/4 (NCT01610284, NCT01633060, NCT01572727)
tumor PI3K testing
buparlisib (BKM120)
metastasized**
GLOW (NCT01202591)
tumor FGFR1 amplification
X
AZD4547
metastasized**
ADAPT (NCT01817452, NCT01745965)
21-gene expression testing; serial gene expression testing
X
various
neoadjuvant/adjuvant
PreFace (NCT01908556)
genome-wide germline genotyping
letrozole
adjuvant
SUCCESS C (NCT00847444)
CTC determination
X
exemestan/ tamoxifen
adjuvant
Circulating Tumor Cells and Circulating Tumor Nucleic Acids
Circulating Tumor Cells and Circulating Tumor Nucleic Acids
Even though some hereditary genetic information can be useful when planning treatment,
the determination of most biomarkers requires biopsies of tumor tissue. Because of
this, attempts to find ways of determining tumor characteristics using blood are particularly
interesting. Such novel analysis methods are known as “liquid biopsies”.
The presence of circulating tumor cells (CTC) in plasma has been consistently associated
with prognosis in patients with metastasized breast cancer [66 ], [67 ], [68 ], [69 ]. The presence of CTCs was found to be an independent prognostic factor even in the
non-metastatic setting [70 ]. The next logical step was to determine the molecular properties of circulating
tumor cells [71 ], [72 ]. Several clinical studies are currently looking at whether this could help with
treatment planning and offer useful information for prognosis [73 ], [74 ], [75 ], [76 ]. However, isolating the CTCs is still relatively expensive and time-consuming and
requires large, cost-intensive equipment which is expensive to run.
A less expensive approach could be to analyze circulating nucleic acids. Tumor cells
in the body release small amounts of DNA into the bloodstream, known as circulating
DNA (ctDNA). This process was first described in 1948 [77 ], [78 ]. But it is only now that new analysis methods offer the opportunity to use these
circulating nucleic acids to research and potentially treat tumor disease. Various
analyses can be carried out using ctDNA. They range from determination of known point
mutations to the sequencing of entire genetic regions or the determination of gene
copy mutations in specific genetic regions. Other genotyping methods are being developed.
The genotyping of ctDNA could offer a relatively feasible way of analyzing genomic
mutations which occur over the course of disease, with the findings used to measure
disease progression or to evaluate the patientʼs response to treatment. One study,
which carried out dynamic profiling of solid tumors, was able to show that mutations
occur in tumors over the course of anti-hormonal treatment [79 ]. The study showed that molecular patterns of somatic mutations specifically alter
the tumorʼs response to treatment and affect progression. Just how this could be used
to plan and monitor treatment is not yet clear. But if such analyses in serum become
possible, they could provide early indications about the efficacy of and the response
to treatment. A few small studies have reported promising results with concordance
between mutations found in tumors and those found in ctDNA from the same patient [80 ].
Inclusion of Genetic Testing in Studies
Inclusion of Genetic Testing in Studies
Only two biomarkers are used in routine clinical practice to plan treatment for patients
with breast cancer: HER2 status and hormone receptor status.
Some clinical studies have included or prospectively will include the determination
of biomarkers (usually testing for mutations or to measure gene expression) in the
study design ([Table 2 ]). Some studies demand specific test results as a prerequisite for inclusion in the
study. Other studies use the test results for prospectively planned subgroup analysis
and/or stratification.
The current PARP inhibitor studies are one example of studies which require a specific
testing result. Most of these studies demand evidence of BRCA mutation for inclusion into the study. Some studies additionally only include patients
with triple negative breast cancer.
Others studies have prospectively integrated test results into the treatment concept
and randomization algorithms. The NNBC3 study used invasion factors uPA/PAI1 to determine
which patients should receive adjuvant chemotherapy. More recent studies have used
multi-gene tests. The ADAPT study concept used a 21-gene test and serial analysis
of tumors to identify patients with an excellent prognosis for whom it was postulated
that they did not require chemotherapy.
PI3K mutation testing is an example of studies where an analysis of projected subgroups
is planned. Although the biological importance of PI3K mutations, particularly in
HER2-positive and hormone receptor-positive breast cancer, is well established and
there are indications that tumor response to anti-HER2 treatment depends on mutation
status [30 ], it is still unclear whether the mutation can predict efficacy when the enzyme itself
is inhibited. In fact, there is some initial evidence that mutation status did not
predict efficacy as measured by progression-free survival in patients treated with
the PI3K inhibitor pictilisib [81 ].
The range of molecular tests included in clinical studies has increased in recent
years. A number of studies completed or still underway in Germany have been listed
in [Table 2 ].
The PRAEGNANT Study (NCT02338167)
The PRAEGNANT Study (NCT02338167)
The PRAEGNANT study network (Prospective Academic Translational Research Network for
the Optimization of Oncological Health Care Quality in the Advanced Therapeutic Setting)
was set up in Germany to take account of some of the recent rapid developments in
molecular medicine in the treatment of patients with metastatic breast cancer.
Given all of the above, the PRAEGNANT study concept was set up for the following reasons:
To carry out molecular tests under study conditions.
To identify suitable breast cancer patients for clinical drug trials based on molecular
testing.
To identify breast cancer patients suitable for clinical drug trials based on conventional
clinical inclusion criteria.
To record treatment-induced toxicities and patientʼs quality of life in routine clinical
practice.
To record, show and benchmark the reality of medical care provided to patients with
advanced metastatic breast cancer.
Patient population, planned sample size and course of the study
Inclusion in this study concept is not limited to patients receiving specific treatment
lines. All breast cancer patients who have either metastasis or inoperable loco-regional
disease can be included in the study, irrespective of the treatment line they are
receiving. Disease progression must be objectively evaluable. Analysis of the first
244 patients included in this study resulted in the distribution shown in [Table 3 ]. Almost 50 % of patients were receiving first-line treatment for metastatic disease.
Table 3 First analysis of treatment lines and the time from diagnosis to metastasis or advanced
loco-regional disease after inclusion of the first 244 patients.
Line of treatment
No. of patients
Time from diagnosis to metastasis in years (mean)
Standard deviation
1
114
4.3
7.2
2
51
4.9
6.6
3
32
5.5
7.1
4
14
5.9
8.5
5
11
5.0
5.2
6+
19
5.6
7.0
Unknown
3
7.3
3.5
Total
244
4.8
7.0
Tumor re-evaluation is done every 2–3 months, with additional assessments carried
out if disease continues to progress and after every change of treatment ([Fig. 1 ]). Adverse Events and Severe Adverse Events are continually reported throughout the
study as is quality of life, and a program (PRO; Patient-reported Outcomes) is used
which allows patients to document their quality of life themselves together with any
Adverse Events.
Fig. 1 Diagram of the PRAEGNANT study with regard to disease progression, inclusion in the
study, blood sampling, tumor assessment and assessment of progression.
The study aims to include a total study population of around 3200 patients . This should ensure that approximately 150 patients receiving first-line and 150
patients receiving second-line treatment in the metastatic setting will be included
in the study for every molecular subtype, even for rare subtypes with a prevalence
of only 10 %. This should provide a good insight into the prognosis and the quality
of life of these patient groups.
Using research findings
Many current studies use specific clinical or molecular characteristics as inclusion
criteria for patients in specific studies (cf. [Table 2 ]). Moreover, some studies require specific prior treatment and a specific progression
over time before patients are included in the study. The PRAEGNANT study should be
utilized to carry out investigations using the available biomaterials obtained in
the study. As part of the analysis of this biomaterial, patients will be evaluated
to see whether they are suitable for recruitment into particular studies. The patients
will be informed of this at the start of recruitment into the PRAEGNANT study and
can give their consent to being informed by their physician if they are found to be
suitable for inclusion in other studies. This applies not only to molecular requirements
but also to clinical parameters. Ideally, the patient is then referred to a center
in the PRAEGNANT network where a specific study is being carried out.
It is planned that around 40 centers will be participating, which will allow prior treatment to be compared between centers.
There are almost no guidelines about the order in which various therapeutic agents
should be used in the metastatic setting. Clinical studies require specific prior
treatments as the prerequisite for inclusion in the study. The information which the
PRAEGNANT study will collect can be used in various ways. Centers can be given feedback
if the treatment they provide does not fulfil the conditions of current studies. Cooperating
centers carrying out studies can be informed about treatments currently used in clinical
practice, allowing the cooperating centers to adapt their inclusion and exclusion
criteria – where possible – to standard treatment practice.
Using the network to exchange knowledge
The aim is to use the information obtained and collected to record differences in
care between the participating centers and to encourage a discussion about these differences.
Patients could be included in this evaluation through the use of Patient-reported
Outcomes (PRO) and specific information should be shared with the patient. In this
information age, data collection should not simply be used to generate study data
but also to provide direct and immediate benefits to the patient and the participating
centers through the documentation and collection of data.
Using the study to show quality of life under real-life conditions
In Germany and other countries, after approval has been granted, as part of the approval
process the authorities often demand evidence based on standard treatment practice
that the study results are confirmed with regard to efficacy and quality of life.
This is precisely the type of data the PRAEGNANT study will collect and evaluate.
Patients will complete validated questionnaires on quality of life at regular intervals.
Substudies will continue to investigate issues of treatment compliance, nutrition
and exercise and look at health economics and pharmacoeconomics. The data will be
used for assessment, evaluated to allow comparisons with clinical studies and made
publicly available. The recording of Adverse Events is of particular interest in this
context because for many new medications physicians only learn the best way of recording
possible side-effects during approval studies. A higher incidence of problems and
more significant clinical problems are noted more often in the post-approval setting
than in approval studies. The musculoskeletal symptoms experienced during treatment
with aromatase inhibitors are a well-known example of this. Another example is stomatitis
in patients receiving everolimus; the incidence of stomatitis initially appeared to
increase in clinical practice but then decreased again as administration of everolimus
continued, possible because of improved prophylactic measures [82 ]. It is effects such as these that the PRAEGNANT study aims to record.
Patient-reported Outcomes (PRO)
In clinical studies, assessment of the patientʼs health is usually done by the physician.
The patients themselves only complete validated questionnaires on their quality of
life. Although this approach ensures a certain degree of objectivity when documenting
side-effects, for example, the requirement of visits at regular intervals and the
dependence on the motivation of the medical staff could also result in a poorer quality
or otherwise affect the quality of the documentation. Modern, internet-based interaction
portals can react flexibly to the documentation requirements of studies and patients.
Various PRO modules covering areas such as quality of life, compliance to treatment,
exercise, nutrition, Adverse Events and others will be tested and validated in the
PRAEGNANT study.
Database concept
The PRAEGNANT study network uses an Oracle-based database with an eCRF format. It
fulfils all the requirements for use by clinical studies (visit-based, recording of
AEs and SAEs, audit trail …). Monitoring of all data is done using a professional
query verification and source data verification system. What distinguishes the PRAEGNANT
network from most other multicenter studies is that the participating centers can
download their center-specific data at any time during the project and use it for
scientific research themselves.
Biomaterial collection
The collection of biomaterials plays a central role in the PRAEGNANT study network.
The obtained biomaterials will be used to carry out high-level analyses which are
relevant for the patient. These include both testing of the primary tumor and the
metastasis and testing of biomaterials obtained from blood ([Figs. 1 ] and [2 ]).
Fig. 2 Analyses planned for breast cancer patients enrolled in the PRAEGNANT study.
Extensive blood samples will be taken from every patient on inclusion in the study,
at each point of disease progression and/or every 3 months ([Fig. 1 ]). Patients will additionally be asked whether they will permit the analysis of archived
tumor samples (primary tumor and metastasis) for research purposes ([Fig. 1 ]).
Blood samples include cannula to obtain serum, plasma, micro-RNA, leukocyte RNA, CTCs,
ctDNA and germline DNA. In addition, procedures which specify how biomaterials obtained
in multicenter studies should be sent to a central laboratory without endangering
the quality of the investigation will be optimized. Patients will additionally be
requested to sign over part of the tumor material from the primary tumor and from
the biopsies of metastases to the study. The tumor block will be requested by the
respective pathologist and re-evaluated using H & E slides, and recuts will be made
for archiving and RNA and DNA extraction. In addition, a tissue micro-array (TMA)
will be created from the tumor block. The PRAEGNANT study network is thus ideally
positioned to carry out the analyses described above for patients and for existing
studies.
Conclusion
More than 10 years after the human genome was decoded, molecular analysis is being
included in routine clinical practice and particularly in the design of clinical studies.
The complexity of these analyses and the size of the subgroups defined by such analysis
means that care networks, research networks and study networks must join forces to
ensure that patients receive the best possible care and to ensure that it will continue
to be possible to develop drugs even for small groups of patients. This is the goal
that the PRAEGNANT study network has set itself for patients with metastatic breast
cancer.
Acknowledgements
This study is supported by research grants from the companies Novartis, Celgene and
Roche. In addition, it receives support from TRR (Translational Research Resources)
of the Gynecological and Obstetrical Department of the University Hospital Erlangen.