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DOI: 10.1055/s-0036-1588731
Revision of the Structure and Total Synthesis of Topsentin C
Publication History
Received: 22 November 2016
Accepted after revision: 01 February 2017
Publication Date:
23 February 2017 (online)
Abstract
An efficient synthetic approach to access (indol-3-yl)ethane-1,2-diamines with a protecting group at the indole N atom from readily available 3-(2-nitrovinyl)indoles is reported. This approach includes solvent-free conjugate addition of O-pivaloylhydroxylamines to 1-Boc-3-(2-nitrovinyl)indoles followed by mild reduction of the adducts. The obtained (indol-3-yl)ethane-1,2-diamines are convenient synthetic precursors for several classes of marine alkaloids. The first total synthesis of racemic topsentin C, a secondary metabolite from Hexadella sp., based on this approach is reported. The initially proposed structure for topsentin C has been revised.
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Secondary metabolites from marine invertebrates continue to be an attractive research topic because new structures and compounds with useful biological activity can be discovered.[1] A whole series of alkaloids containing the (indol-3-yl)ethane-1,2-diamine moiety in their structures and their aromatized derivatives were isolated from deep-water sponges in the last 30 years.[2] In particular, spongotines (1) and topsentins (2) contain two indoles connected through imidazoline or imidazole linker. Two indole substituents in the structures of hamacanthins (3) and dragmacidins (4) are bonded to dihydropyrazinone and piperazine rings, respectively (Figure [1]). The (indol-3-yl)ethane-1,2-diamine moiety in several alkaloids of the examined group contains one or two methyl groups; for example, dragmacidins A and B (4) and topsentin C. The latter compound was isolated from Hexadella sp., and its structure was assigned to imidazoline derivative 5a (Figure [2]).[3] Furthermore, the alkaloids could contain one or more Br atoms, which in general is characteristic of marine secondary metabolites.[4] Notably, the 1,2-diaminoethyl group in the indole 3-position, in contrast to 2-aminoethyl, is uncharacteristic for terrestrial indole alkaloids.
Total syntheses of many of the natural products from this group have been reported;[2] [5] [6] however, no synthesis of topsentin C has been reported. Compounds exhibiting antibacterial, cytotoxic, antiviral, and fungicidal properties were discovered among these alkaloids and their synthetic analogues.[2,7]
(Indol-3-yl)ethane-1,2-diamines could be convenient synthetic precursors of topsentins, spongotines, and hamacanthins.[5a] [b] [c] Furthermore, these diamines are of independent interest because their simple derivatives were recently shown to be capable of preventing the development of resistance to fluoroquinolone antibiotics in Staphylococcus aureus.[8]
Only two synthetic approaches to (indol-3-yl)ethane-1,2-diamines have been published and neither of them allows the corresponding N 1-methyl derivatives to be produced.[5a] [b] [c] It was also reported that diamines of this type with an unsubstituted indole N atom are relatively stable only as the salts.[5a] We propose a convenient preparative synthetic approach to (indol-3-yl)ethane-1,2-diamines (6) with a protected indole N atom that is based on mild reduction of 7, the addition product of O-pivaloylhydroxylamines (8) and 3-nitrovinylindoles (9) (Scheme [1]). The proposed method has been used for the total synthesis of topsentin C, the previously proposed structure of which has been revised by us.
Starting nitrovinylindoles 9, with tert-butoxycarbonyl-protected indole N atoms, were synthesized from the corresponding indoles by formylation using N,N-dimethylformamide (DMF) and SOCl2 followed by condensation of the obtained aldehydes with nitromethane and addition of the protecting group in the presence of 4-(N,N-dimethylamino)pyridine (DMAP) (Scheme [2]). We also prepared 1-acetyl-3-[(E)-2-nitrovinyl]-1H-indole (9f) and 1-methyl-3-[(E)-2-nitrovinyl]-1H-indole (9g) according to described procedures.[9] [10]
Reduction of the adducts of α,β-unsaturated nitrocompounds with amines, O-alkylhydroxylamines or azide anion was proposed earlier for the synthesis of vicinal diamines.[11] [12] [13] The first type of adduct was unstable, although they could be isolated as the more stable salts.[11] Adducts with O-alkylhydroxylamines or azide anion were more stable.[12] [13] However, catalytic hydrogenation or heating with Zn dust in HOAc was required to cleave the hydroxylamine N–O bond.[12] Catalytic hydrogenation was also used to reduce the azido group.[13] The proposed methods turned out to be ineffective for the synthesis of Br-containing (indol-3-yl)ethane-1,2-diamines 6. Thus, the products 10 from the reaction of methylamine or benzylamine with nitrovinylindole 9b could not be isolated; starting 9b was recovered and the reaction mixture formed a resin. Stable adduct 11 with O-benzylhydroxylamine was reduced as expected by H2 over Pd/C with hydrogenolysis of the C–Br bond to form diamine 6a (Scheme [3]).
Indolic adduct 11 decomposed upon heating with Zn in HOAc, and reduction with Zn under milder conditions was not complete. The yield of diamine 6b was <15% even when the amount of Zn and the reaction time were increased; the main product was 12 (Scheme [3]).
a Nitrovinylindole 9g, with a methyl on the indole N atom, did not react.
O-Acylhydroxylamines have highly labile N–O bonds and have recently been used in synthetic procedures based on sigmatropic shifts with cleavage of N–O bonds[14] in addition to amination reaction.[15] Conjugate addition of O-acylhydroxylamines to electron-deficient alkenes has not yet been described, in contrast to O-alkylhydroxylamines. We decided to study the possibility of adding O-pivaloylhydroxylamine and its N-methyl derivative to nitrovinylindoles 9 followed by reduction of the resulting adducts. Derivatives of sterically hindered pivalic acid were chosen because they isomerize rather slowly into the corresponding hydroxamic acids, in contrast to the simpler O-acylhydroxylamines.[16]
Hydrochlorides of O-pivaloylhydroxylamine and N-methyl-O-pivaloylhydroxylamine were synthesized by using the previously reported methods.[14a] [16] [17] The corresponding free bases were isolated immediately before performing the next step.
As it turned out, the reaction of nitrovinylindoles 9a with O-pivaloylhydroxylamine (8a, 1.5 equiv) in CH2Cl2 was complete in 96 hours and gave target adduct 7a. We also found that the solvent-free reaction was much faster. The reagents could be mixed and left overnight in a closed vessel. The nitrovinylindoles dissolved gradually, then crystals of the product formed. The solvent-free reaction was clearly advantageous from a green chemistry point of view. In this manner, we obtained the series of adducts 7a–h in high yields (Table [1]).
The next step was the reduction of adducts 7. We decided to use Zn and acid, anticipating that their hydroxylamine N–O bond would undergo reductive cleavage at room or reduced temperature. Thus, the reduction of 7a using Zn (10 equiv) and HOAc in MeOH afforded target diamine 6a in 34% yield (Table [2], entry 1).
The reaction proceeded rather quickly. However, it was accompanied by the formation of several unidentified side products. Increasing the reaction time did not lead to an increase in the yield of 6a. We found that the yield could be increased by adding H2O and EtOAc to the reaction mixture (keeping the solution homogeneous) and by doubling the amount of Zn (cf. Table [2], entries 3 and 4). Replacing HOAc with concentrated HCl at reduced temperature led to a further increase in the yield (entry 5). Finally, the use of HBr (40%) allowed target diamine 6a to be obtained with a very good yield (entry 6). It was also possible to conduct the reduction of adduct 7a in the presence of NH4Br (entry 7). The reduction of adduct 7c, with a methyl group on the hydroxylamine N atom, was more difficult. However, increasing the reaction time and amount of Zn provided a high yield of diamine 6c (entry 9). The developed method was extended to adducts 7b and 7d–f (Table [3]). Boc derivatives gave the corresponding diamines 6b and 6d–g in good and high yields, whereas diamine 6h, with an acetyl on the indole N atom, was unstable and decomposed even in solution.
a Reaction conditions: Zn (15 equiv), HBr (30 equiv), 2 h.
b Reaction conditions: Zn (20 equiv), HBr (40 equiv), 6 h.
c Decomposition of the product occurred.
Having established a convenient preparative method for N 1-methyl(indol-3-yl)ethane-1,2-diamines, we focused on the total synthesis of the proposed structure for topsentin C (5a), which is related to spongotines 1 and other previously isolated topsentines. The imidazoline fragment of 5a and its analogue 5b, without a Br atom, was constructed by using the previously reported synthetic method for imidazolines that involved condensation of the vicinal diamines with aldehydes (including α-keto aldehydes) followed by oxidation of the resulting cyclic aminal.[5c] [18] The required indolylglyoxals 14a and 14b were prepared from corresponding 3-acetylindoles 15a and 15b through iodination followed by Kornblum oxidation (Scheme [4]).[19]
The aforementioned syntheses of indolylglyoxals 14a and 14b, condensations with diamines 6c and 6e, and subsequent oxidations to imidazolines 16a and 16b were carried out in one pot. This made the developed procedure attractive for preparative reactions. The protecting group could be removed to afford 5a and 5b. As it turned out, the spectral characteristics of 5a synthesized by us and the characteristics of topsentin C that was isolated from the natural source, differed dramatically. Therefore, the initially proposed structure of topsentin C had to be revised. Thus, the synthesized 5a was a methylated spongotine C derivative that has not yet been observed in nature. The developed method enables analogues of spongotines and topsentins to be synthesized to study their biological properties, which are known to change abruptly if even a single methyl is added to the molecule.[17]
We assumed that natural topsentin C was structurally related to hamacanthins A (3) but not spongotines (1), and was the 1-methyl derivative of hamacanthin A 17a (Figure [3]),[20] which should have a set of NMR signals similar to that of 5a.
We synthesized bis(indolyl)dihydropyrazinones 17a and 17b through cyclization of diamines 6e and 6c with indoleglyoxylic acid chlorides 18a and 18b to confirm this hypothesis (Scheme [5]).
a Recorded in acetone-d 6; shift in ppm, coupling in Hz.
b Double resonance experiments and COSY gave the same interpretation of these signals as shown for natural topsentin C (see the Supporting Information).
Acid chlorides 18a and 18b were obtained through acylation of the corresponding indoles by using oxalylchloride according to published methods.[6k] The reaction first gave a mixture of amides 19 and 20, which were further cyclized without isolation (Scheme [6]). As noted earlier during the development of synthetic methods for hamacanthins, these amides can undergo reversible transformations under the cyclization conditions via intermediate 21, and can form a mixture of isomeric bis(indolyl)dihydropyrazinones.[6b] In this case, the cyclization was unidirectional because of the methyl group, so that 22a and 22b were isolated only.[21] These compounds were converted into target 17a and 17b by removing the protecting group. The structure of compound 17a was established by X-ray crystallographic analysis (Figure [4]).
The spectral characteristics of bis(indolyl)dihydropyrazinone 17a were consistent with those of natural topsentin C,[3] [22] in contrast to imidazoline 5a (Table [4]). This data confirmed our hypothesis regarding the structure of the natural topsentin C.
Thus, we have developed a convenient preparative synthetic method to prepare (indol-3-yl)ethane-1,2-diamines and found that the natural topsentin C has the structure 17a. The total synthesis of racemic 17a was carried out in seven steps from 6-bromoindole 9c in 55% overall yield.
Starting reagents were either purchased from commercial sources and used without additional purification or were prepared according to reported procedures. 1H and 13C NMR spectra were acquired with 400, 500, or 600 MHz spectrometers at r.t. and referenced to the residual signals of the solvent (for 1H and 13C). The solvents for NMR samples were DMSO-d 6, CDCl3, and acetone-d 6. Chemical shifts are reported in parts per million (δ, ppm). Coupling constants are reported in Hertz (J, Hz). The peak patterns are indicated as: s, singlet; d, doublet; t, triplet; q, quadruplet; m, multiplet; dd, doublet of doublets; br s, broad singlet. Signal assignment was based on COSY, HSQC, HMBC and NOESY experiments. Infrared spectra were measured with an Infralum FT-801 FT/IR instrument. The wavelengths are reported in reciprocal centimeters (νmax, cm–1). Mass spectra were recorded with LCMS-8040 triple quadrupole liquid chromatograph mass-spectrometer from Shimadzu (ESI) and Kratos MS-30 mass spectrometer (EI, 70 eV). Elemental analysis was performed with an Euro Vector EA-3000 elemental analyzer. The X-ray data collection of 17a was performed with a Bruker APEX-II CCD diffractometer at 120 K. Details of the X-ray structure determination are given in the Supporting Information. The progress of the reaction was monitored by TLC and the spots were visualized under UV light (254 or 365 nm). Column chromatography was performed using silica gel (230–400 mesh). Melting points were determined with a SMP-10 apparatus and are uncorrected. Solvents were distilled and dried according to standard procedures.
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tert-Butyl 3-[(E)-2-Nitrovinyl]-1H-indole-1-carboxylate (9a)[23]
SOCl2 (13.7 mL, 0.188 mol) at 0–5 °C was added dropwise to anhydrous DMF (14.6 mL, 0.188 mol) and the solution was stirred at r.t. for 30 min. The resulting mixture was degassed under vacuum and the residue was diluted with anhydrous DMF (26 mL) and treated with a solution of indole (20.0 g, 0.171 mol) in DMF (10 mL) dropwise at 0–5 °C over 10 min. The mixture was stirred at r.t. for 40 min, then treated with ice (100 g) and NaOH solution (30%) was added until pH ca. 8. The mixture was heated to reflux, and cooled. The resulting precipitate was filtered off, rinsed with H2O (5×), dried in air, heated at reflux in EtOH (40 mL), cooled, filtered off again, and dried in air to afford 1H-indole-3-carbaldehyde (22.5 g, 91%).
A solution of 1H-indole-3-carbaldehyde (12.5 g, 0.086 mol) and NH4OAc (6.6 g, 0.086 mmol) in CH3NO2 (46 mL, 0.861 mol) was heated at reflux for 45 min, cooled to r.t., and diluted with H2O (150 mL). The resulting precipitate was filtered off, washed with H2O (5×), dried on air, heated at reflux in EtOH (60 mL), cooled, filtered off again and dried on air to afford 3-[(E)-2-nitrovinyl]-1H-indole (11.3 g, 70%).
To a solution of 3-[(E)-2-nitrovinyl]-1H-indole (5.6 g, 30 mmol) and DMAP (0.37 g, 3.0 mmol) in anhydrous THF (30 mL) was added dropwise a solution of Boc2O (9.9 g, 45.4 mmol) in anhydrous THF (30 mL) at 0–5 °C over a period of 15 min. The reaction mixture was stirred at r.t. for 3 h, and concentrated in vacuo. The residue was dissolved in CH2Cl2 (100 mL), washed with citric acid solution (10%, 30 mL), H2O (30 mL), and concd NaCl solution (20 mL), then dried over anhydrous Na2SO4. The CH2Cl2 was evaporated in vacuo and the residue was heated at reflux in MeOH (30 mL) and cooled. The resulting precipitate was filtered off, washed twice with cold hexane, and dried on air to afford tert-butyl 3-[(E)-2-nitrovinyl]-1H-indole-1-carboxylate.
Yield: 7.6 g (55% from indole); yellow solid; mp 144–145 °C (MeOH).
1H NMR (600 MHz, DMSO-d 6): δ = 8.55 (s, 1 H), 8.36 (d, J = 13.7 Hz, 1 H, CH=CHNO2), 8.19 (d, J = 13.7 Hz, 1 H, CH=CHNO2), 8.11 (d, J = 8.1 Hz, 1 H), 8.02 (d, J = 7.1 Hz, 1 H), 7.40–7.46 (m, 1 H), 7.33–7.39 (m, 1 H), 1.64 (s, 9 H, C(CH3)3).
13C NMR (150 MHz, DMSO-d 6): δ = 148.79, 136.50, 136.06, 134.27, 132.37, 127.15, 126.14, 124.54, 121.40, 115.67, 112.76, 85.72, 28.08 (3С).
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tert-Butyl 5-Bromo-3-[(E)-2-nitrovinyl]-1H-indole-1-carboxylate (9b); Typical Procedure
5-Bromoindole (1.35 g, 6.9 mmol) was formylated as described for 1H-indole-3-carbaldehyde to produce 6-bromo-1H-indole-3-carbaldehyde (1.50 g, 97%) with the exception that the obtained product was not purified by refluxing in EtOH.
5-Bromo-1H-indole-3-carbaldehyde (1.50 g, 6.7 mmol) and NH4OAc (0.52 g, 6.7 mmol) were heated at reflux in CH3NO2 (18 mL, 335 mmol) for 45 min, cooled to r.t., and treated with H2O (70 mL). The product was extracted with EtOAc (70 mL), washed with H2O (5 × 50 mL) and NaCl solution (20 mL), and dried over anhydrous Na2SO4. The solvent was removed in vacuo to afford 6-bromo-3-[(E)-2-nitrovinyl]-1H-indole (1.72 g, 96%, brownish crystals), which was dried in vacuo and used without further purification.
A suspension of 5-bromo-3-[(E)-2-nitrovinyl]-1H-indole (1.72 g, 6.4 mmol) and DMAP (0.08 g, 0.64 mmol) in anhydrous THF (7 mL) was treated with a solution of Boc2O (2.1 g, 9.7 mmol) in anhydrous THF (7 mL) dropwise at 0–5 °C over a period of 15 min, stirred at r.t. for 3 h, and concentrated in vacuo. The residue was dissolved in CH2Cl2 (50 mL), washed with citric acid solution (10%, 20 mL), H2O (20 mL), and concd NaCl solution (15 mL), and dried over anhydrous Na2SO4. The CH2Cl2 was evaporated in vacuo and the residue was purified by chromatography on a column of silica gel (EtOAc–hexane, 6:1) to provide tert-butyl 5-bromo-3-[(E)-2-nitrovinyl]-1H-indole-1-carboxylate.
Yield: 2.11 g (83% from 5-bromoindole); pale-yellow solid; mp 156–157 °C (MeOH); Rf = 0.55 (EtOAc–hexane, 1:8).
IR (film): 3130, 2983, 2300 w, 1741 s (CO), 1639, 1509, 1452, 1368, 1344, 1240, 1153, 1107, 956, 853, 803, 764, 649, 613, 579 cm–1.
1H NMR (400 MHz, DMSO-d 6): δ = 8.57 (s, 1 H), 8.33 (d, J = 13.7 Hz, 1 H, CH=CHNO2), 8.27 (d, J = 1.9 Hz, 1 H), 8.26 (d, J = 13.7 Hz, 1 H, CH=CHNO2), 8.02 (d, J = 8.8 Hz, 1 H), 7.56 (dd, J = 8.8, 1.9 Hz, 1 H), 1.65 (s, 9 H, C(CH3)3).
13C NMR (100 MHz, DMSO-d 6): δ = 147.89, 136.57, 134.27, 133.94, 130.89, 128.52, 128.16, 123.08, 116.83, 116.76, 111.47, 85.53, 27.48 (3С).
MS (EI, 70 eV): m/z (%) = 368/366 (4) [M]+, 312/310 (7) [M – C4H8]+, 268/266 (31) [M – C4H8 – CO2]+, 219 (21), 140 (30), 57 (100).
Anal. Calcd for C15H15BrN2O4: C, 49.06; H, 4.12; N, 7.63. Found: C, 49.19; H, 4.15; N, 7.55.
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tert-Butyl 6-Bromo-3-[(E)-2-nitrovinyl]-1H-indole-1-carboxylate (9c)
Yield: 2.15 g (85% from 6-bromoindole); pale-yellow solid; mp 124–126 °C (MeOH; Rf = 0.62 (EtOAc–hexane, 1:8).
IR (film): 3129, 2985, 2300 w, 1740 s (CO), 1635, 1505, 1427, 1341, 1299, 1238, 1144, 1106, 965, 842, 808, 764, 726, 650, 591 cm–1.
1H NMR (600 MHz, CDCl3): δ = 8.43 (s, 1 H), 8.12 (d, J = 13.6 Hz, 1 H, CH=CHNO2), 7.98 (s, 1 H), 7.71 (d, J = 13.6 Hz, 1 H, CH=CHNO2), 7.54 (d, J = 8.3 Hz, 1 H), 7.48 (dd, J = 8.3, 1.7 Hz, 1 H), 1.71 (s, 9 H, C(CH3)3).
13C NMR (150 MHz, CDCl3): δ = 148.29, 137.09, 136.22, 132.14, 130.97, 127.58, 125.79, 121.20, 119.87, 119.27, 112.37, 86.27, 28.15 (3С).
MS (EI, 70 eV): m/z (%) = 368/366 (7) [M]+, 312/310 (11) [M – C4H8]+, 268/266 (40) [M – C4H8 – CO2]+, 221 (18), 140 (21), 57 (100).
Anal. Calcd for C15H15BrN2O4: C, 49.06; H, 4.12; N, 7.63. Found: C, 49.24; H, 4.19; N, 7.60.
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tert-Butyl 5-Methoxy-3-[(E)-2-nitrovinyl]-1H-indole-1-carboxylate (9d)
Yield: 1.73 g (79% from 5-methoxyindole); yellow solid; mp 153–154 °C (MeOH); Rf = 0.52 (EtOAc–hexane, 1:8).
IR (film): 3139, 2982, 2945, 2296 w, 1732 s (CO), 1633, 1544, 1500, 1374, 1325, 1251, 1161, 1097, 1024, 969, 834, 800, 765, 640, 592 cm–1.
1H NMR (600 MHz, DMSO-d 6): δ = 8.52 (s, 1 H), 8.37 (d, J = 13.6 Hz, 1 H, CH=CHNO2), 8.24 (d, J = 13.6 Hz, 1 H, CH=CHNO2), 7.98 (d, J = 9.0 Hz, 1 H), 7.45 (d, J = 2.6 Hz, 1 H), 7.01 (dd, J = 9.0, 2.6 Hz, 1 H), 3.86 (s, 3 H, OCH3), 1.64 (s, 9 H, C(CH3)3).
13C NMR (150 MHz, DMSO-d 6): δ = 156.54, 148.24, 135.93, 133.46, 131.80, 129.90, 127.84, 115.87, 114.40, 112.13, 103.33, 85.04, 55.73, 27.56 (3С).
MS (EI, 70 eV): m/z (%) = 319 (8), 318 (41) [M]+, 263 (17), 262 (81) [M – C4H8]+, 219 (23), 218 (28) [M – C4H8 – CO2]+, 186 (31), 175 (69), 156 (29), 57 (100).
Anal. Calcd for C16H18N2O5: C, 60.37; H, 5.70; N, 8.80. Found: C, 60.28; H, 5.76; N, 8.79.
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tert-Butyl 6-Chloro-3-[(E)-2-nitrovinyl]-1H-indole-1-carboxylate (9e)
Yield: 1.71 g (77% from 6-chloroindole); mp 130–132 °C (MeOH); Rf = 0.62 (EtOAc–hexane, 1:8).
IR (film): 3131, 2983, 2294 w, 1741 s (CO), 1634, 1508, 1431, 1340, 1299, 1240, 1145, 1103, 968, 845, 810, 762, 732, 660, 599 cm–1.
1H NMR (400 MHz, DMSO-d 6): δ = 8.54 (s, 1 H), 8.32 (d, J = 13.7 Hz, 1 H, CH=CHNO2), 8.17 (d, J = 13.7 Hz, 1 H, CH=CHNO2), 8.08 (d, J = 1.7 Hz, 1 H), 8.04 (d, J = 8.6 Hz, 1 H), 7.36 (dd, J = 8.6, 1.7 Hz, 1 H), 1.65 (s, 9 H, C(CH3)3).
13C NMR (100 MHz, DMSO-d 6): δ = 147.85, 136.40, 135.86, 133.93, 131.10, 130.14, 125.40, 123.99, 122.14, 114.88, 111.96, 85.68, 27.45 (3С).
MS (EI, 70 eV): m/z (%) = 324 (14)/322 (42) [M]+, 268 (9)/266 (27) [M – C4H8]+, 224 (16)/222 (55) [M – C4H8 – CO2]+, 179 (26), 174 (26), 113 (97), 57 (100).
Anal. Calcd for C15H15ClN2O4: C, 55.82; H, 4.68; N, 8.68. Found: C, 55.70; H, 4.73; N, 8.63.
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tert-Butyl 3-{1-[(Benzyloxy)amino]-2-nitroethyl}-5-bromo-1H-indole-1-carboxylate (11)
To a solution of 5-bromo-3-[(E)-2-nitrovinyl]-1H-indole (0.55 g, 1.5 mmol) in anhydrous THF (3 mL), O-benzylhydroxylamine (0.19 g, 1.6 mmol) was added. The mixture was stirred at r.t. for 1 h and allowed to stand overnight. After removing the volatile components in vacuo, the adduct 11 was obtained.
Yield: 0.74 g (ca. 100%); viscous amber oil; Rf = 0.53 (EtOAc–hexane, 1:8).
IR (film): 3253, 2980, 2931, 1738 s (CO), 1554, 1451, 1373, 1278, 1154, 1057, 843, 805, 750, 699, 609 cm–1.
1H NMR (400 MHz, CDCl3): δ = 8.03 (d, J = 8.9 Hz, 1 H), 7.75 (d, J = 1.9 Hz, 1 H), 7.58 (s, 1 H), 7.44 (dd, J = 8.9, 1.9 Hz, 1 H), 7.30–7.40 (m, 5 H, Ph), 5.84 (br s, 1 H, NH), 4.93–5.05 (m, 2 H, CHCHaHb + CHCHa H b), 4.67–4.74 (m, 2 H, CH 2Ph), 4.65 (dd, J = 11.2, 4.2 Hz, 1 H, CHCH aHb), 1.67 (s, 9 H, OC(CH3)3).
13C NMR (125 MHz, CDCl3): δ = 148.88, 136.92, 134.18, 130.03, 128.75, 128.48, 128.20, 127.94, 125.45, 122.16, 116.90, 116.36, 114.49, 84.78, 77.08, 76.40, 55.70, 28.09.
MS (ESI): m/z = 492/490 [M + H]+.
Anal. Calcd for C22H24BrN3O5: C, 53.89; H, 4.93; N, 8.57. Found: C, 54.01; H, 5.00; N, 8.58.
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Addition of O-Pivaloylhydroxylamines 8a,b to Nitrovinylindoles 9a–f; General Procedure
The hydrochloride salt of the corresponding O-pivaloylhydroxylamine (6 mmol) was dissolved in CH2Cl2 (20 mL) and carefully shaken with saturated aqueous NaHCO3 solution, then the organic phase was washed with concd NaCl solution and dried over anhydrous Na2SO4. The solvent was removed in vacuo at 30 °C and the resulting O-pivaloylhydroxylamine (ca. 5.2 mmol) was carefully mixed with nitrovinylindole (3.5 mmol) in a round-bottom vial and allowed to stand overnight at r.t. The reaction mixture was triturated with hexane (7 mL) and the resulting crystals of adducts 7a–h were filtered, washed with cold hexane (2 × 4 mL), and dried in vacuo.
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tert-Butyl 3-{1-[(Pivaloyloxy)amino]-2-nitroethyl}-1H-indole-1-carboxylate (7a)
Yield: 1.33 g (94%); light-brown solid; mp 109–111 °C (hexane); Rf = 0.46 (EtOAc–hexane, 1:8).
IR (film): 3229, 2977, 2936, 1746 s (CO), 1727 s (CO), 1555, 1452, 1371, 1278, 1235, 1154, 1085, 822, 762, 661, 594 cm–1.
1H NMR (400 MHz, CDCl3): δ = 8.19 (d, J = 8.1 Hz, 1 H), 7.89 (d, J = 3.5 Hz, 1 H, NH), 7.70 (d, J = 7.7 Hz, 1 H), 7.67 (s, 1 H), 7.39 (dd, J = 8.1, 7.3 Hz, 1 H), 7.31 (dd, J = 7.7, 7.3 Hz, 1 H), 5.14–5.26 (m, 1 H, CHCHaHb), 5.01 (dd, J = 12.9, 8.0 Hz, 1 H, CHCHa H b), 4.75 (dd, J = 12.9, 4.5 Hz, 1 H, CHCH aHb), 1.68 (s, 9 H, OC(CH3)3), 1.24 (s, 9 H, C(CH3)3).
13C NMR (100 MHz, CDCl3): δ = 178.21, 149.15, 135.48, 127.82, 125.36, 124.60, 123.23, 118.99, 115.61, 113.38, 84.51, 78.04, 56.25, 38.44, 28.15 (3C), 26.90 (3С).
MS (ESI): m/z = 406 [M + H]+, 345 [M – CH3NO2 + H]+, 304 [M – (CH3)3CO2H + H]+.
Anal. Calcd for C20H27N3O6: C, 59.25; H, 6.71; N, 10.36. Found: C, 59.31; H, 6.73; N, 10.11.
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tert-Butyl 3-{1-[(Pivaloyloxy)amino]-2-nitroethyl}-5-bromo-1H-indole-1-carboxylate (7b)
Yield: 1.62 g (96%); white solid; mp 108–109 °C (hexane); Rf = 0.39 (EtOAc–hexane, 1:8).
IR (film): 3260, 2974, 2935, 1728 s (CO), 1557, 1453, 1378, 1276, 1157, 1092, 1057, 872, 805, 778, 662, 604 cm–1.
1H NMR (400 MHz, CDCl3): δ = 8.07 (d, J = 8.8 Hz, 1 H), 7.84 (d, J = 1.8 Hz, 1 H), 7.66 (s, 1 H), 7.47 (dd, J = 8.8, 1.8 Hz, 1 H), 7.89 (br s, 1 H, NH), 5.11 (dd, J = 7.7, 4.8 Hz, 1 H, CHCHaHb), 4.99 (dd, J = 12.8, 7.7 Hz, 1 H, CHCHa H b), 4.72 (dd, J = 12.8, 4.8 Hz, 1 H, CHCH aHb), 1.67 (s, 9 H, OC(CH3)3), 1.24 (s, 9 H, C(O)C(CH3)3).
13C NMR (100 MHz, CDCl3): δ = 178.26, 148.84, 134.37, 129.59, 128.39, 125.86, 121.98, 117.14, 116.75, 112.91, 85.13, 77.87, 56.20, 38.54, 28.19 (3C), 27.00 (3C).
MS (ESI): m/z = 486/484 [M + H]+, 425/423 [M – CH3NO2 + H]+, 384/382 [M – (CH3)3CO2H + H]+.
Anal. Calcd for C20H26BrN3O6: C, 49.60; H, 5.41; N, 8.68. Found: C, 49.71; H, 5.50; N, 8.53.
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tert-Butyl 3-{1-[(Pivaloyloxy)(methyl)amino]-2-nitroethyl}-1H-indole-1-carboxylate (7c)
Yield: 1.42 g (97%); light-beige solid; mp 113 °C (hexane); Rf = 0.47 (EtOAc–hexane, 1:8).
IR (film): 2977, 2931, 1754 s (CO), 1737 s (CO), 1557, 1452, 1378, 1248, 1153, 1103, 1075, 1026, 845, 750, 702, 659 cm–1.
1H NMR (400 MHz, CDCl3): δ = 8.18 (d, J = 7.7 Hz, 1 H), 7.81 (d, J = 7.7 Hz, 1 H), 7.69 (s, 1 H), 7.38 (dd, J = 8.1, 7.3 Hz, 1 H), 7.31 (dd, J = 7.8, 7.7 Hz, 1 H), 5.08 (dd, J = 7.4, 5.6 Hz, 1 H, CHCHaHb), 5.00 (dd, J = 12.7, 7.4 Hz, 1 H, CHCHa H b), 4.65 (dd, J = 12.7, 5.6 Hz, 1 H, CHCH aHb), 2.68 (s, 3 H, NCH3), 1.69 (s, 9 H, OC(CH3)3), 1.26 (s, 9 H, C(O)C(CH3)3).
13C NMR (100 MHz, CDCl3): δ = 175.96, 149.16, 135.30, 128.65, 125.22, 124.99, 123.24, 119.51, 115.36, 113.78, 84.38, 77.17, 62.04, 43.84, 38.67, 28.10 (3C), 27.05 (3C).
MS (ESI): m/z = 420 [M + H]+, 318 [M – (CH3)3CO2H + H]+.
Anal. Calcd for C21H29N3O6: C, 60.13; H, 6.97; N, 10.02. Found: C, 60.27; H, 7.03; N, 10.00.
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tert-Butyl 3-{1-[(Pivaloyloxy)(methyl)amino]-2-nitroethyl}-5-bromo-1H-indole-1-carboxylate (7d)
Yield: 1.55 g (89%); amorphous amber solid; Rf = 0.53 (EtOAc–hexane, 1:8).
IR (film): 2977, 2933, 1744 s (CO), 1602, 1559, 1451, 1370, 1276, 1153, 1092, 1057, 842, 807, 767, 679, 609 cm–1.
1H NMR (600 MHz, CDCl3): δ = 8.07 (br s, 1 H), 7.93 (d, J = 1.7 Hz, 1 H), 7.68 (s, 1 H), 7.47 (dd, J = 9.0, 1.7 Hz, 1 H), 4.95–5.03 (m, 2 H, CHCHaHb + CHCHa H b), 4.63 (dd, J = 11.6, 5.0 Hz, 1 H, CHCH aHb), 2.67 (s, 3 H, NCH3), 1.68 (s, 9 H, OC(CH3)3), 1.26 (s, 9 H, C(O)C(CH3)3).
13C NMR (100 MHz, CDCl3): δ = 175.79, 148.76, 134.11, 130.37, 128.20, 126.17, 122.20, 116.87, 116.71, 113.16, 84.94, 77.00, 61.86, 43.83, 38.66, 28.08 (3C), 27.07 (3C).
MS (ESI): m/z = 500/498 [M + H]+, 398/396 [M – (CH3)3CO2H + H]+.
Anal. Calcd for C21H28BrN3O6: C, 50.61; H, 5.66; N, 8.43. Found: C, 50.90; H, 5.81; N, 8.25.
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tert-Butyl 3-{1-[(Pivaloyloxy)(methyl)amino]-2-nitroethyl}-6-bromo-1H-indole-1-carboxylate (7e)
Yield: 1.70 g (98%); light-beige solid; mp 115–116 °C (hexane); Rf = 0.39 (EtOAc–hexane, 1:8).
IR (film): 2976, 2933, 1762 s (CO), 1727 s (CO), 1561, 1433, 1370, 1255, 1152, 1097, 865, 818, 772, 679, 590 cm–1.
1H NMR (600 MHz, CDCl3): δ = 8.40 (s, 1 H), 7.70 (d, J = 8.3 Hz, 1 H), 7.64 (s, 1 H), 7.42 (dd, J = 8.3, 1.7 Hz, 1 H), 5.02 (dd, J = 7.4, 5.8 Hz, 1 H, CHCHaHb), 4.98 (dd, J = 12.4, 7.4 Hz, 1 H, CHCHa H b), 4.63 (dd, J = 12.7, 5.8 Hz, 1 H, CHCH aHb), 2.66 (s, 3 H, NCH3), 1.69 (s, 9 H, OC(CH3)3), 1.26 (s, 9 H, C(O)C(CH3)3).
13C NMR (100 MHz, CDCl3): δ = 175.92, 148.72, 136.02, 127.39, 126.53, 125.29, 120.84, 119.09, 118.61, 113.91, 85.01, 77.00, 62.02, 43.70, 38.64, 28.03 (3C), 27.02 (3C).
MS (ESI): m/z = 522/520 [M + Na]+.
Anal. Calcd for C21H28BrN3O6: C, 50.61; H, 5.66; N, 8.43. Found: C, 50.73; H, 5.72; N, 8.42.
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tert-Butyl 3-{1-[(Pivaloyloxy)(methyl)amino]-2-nitroethyl}-5-methoxy-1H-indole-1-carboxylate (7f)
Yield: 1.43 (91%); yellow solid; mp 96 °C (hexane); Rf = 0.33 (EtOAc–hexane, 1:8).
IR (film): 2971, 2935, 1755 s (CO), 1731 s (CO), 1557, 1480, 1382, 1286, 1157, 1098, 1070, 849, 807, 767, 677, 626 cm–1.
1H NMR (600 MHz, CDCl3): δ = 8.04 (br s, 1 H), 7.64 (s, 1 H), 7.28 (d, J = 1.7 Hz, 1 H), 6.97 (dd, J = 9.0, 1.7 Hz, 1 H), 5.02 (dd, J = 7.4, 5.0 Hz, 1 H, CHCHaHb), 4.98 (dd, J = 12.4, 7.4 Hz, 1 H, CHCHa H b), 4.63 (dd, J = 12.4, 5.0 Hz, 1 H, CHCH aHb), 3.90 (s, 3 H, OCH3), 2.68 (s, 3 H, NCH3), 1.67 (s, 9 H, OC(CH3)3), 1.25 (s, 9 H, C(O)C(CH3)3).
13C NMR (100 MHz, CDCl3): δ = 175.89, 156.27, 149.14, 130.00, 129.53, 125.39, 116.13, 114.07, 113.70, 102.11, 84.21, 77.00, 62.13, 55.78, 43.71, 38.66, 28.12 (3C), 27.06 (3C).
MS (ESI): m/z = 450 [M + H]+, 348 [M – (CH3)3CO2H + H]+.
Anal. Calcd for C22H31N3O7: C, 58.78; H, 6.95; N, 9.35. Found: C, 58.89; H, 7.00; N, 9.23.
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tert-Butyl 3-{1-[(Pivaloyloxy)(methyl)amino]-2-nitroethyl}-6-chloro-1H-indole-1-carboxylate (7g)
Yield: 1.54 (97%); light-brown solid; mp 108–109 °C (hexane); Rf = 0.39 (EtOAc–hexane, 1:8).
IR (film): 2976, 2906, 1754 s (CO), 1744 s (CO), 1562, 1439, 1368, 1256, 1157, 1100, 866, 817, 761, 661, 600 cm–1.
1H NMR (400 MHz, CDCl3): δ = 8.21 (s, 1 H), 7.75 (d, J = 8.5 Hz, 1 H), 7.65 (s, 1 H), 7.27 (dd, J = 8.5, 1.7 Hz, 1 H), 4.92–5.02 (m, 2 H, CHCHaHb + CHCHa H b), 4.63 (dd, J = 12.1, 5.3 Hz, 1 H, CHCH aHb), 2.66 (s, 3 H, NCH3), 1.68 (s, 9 H, OC(CH3)3), 1.25 (s, 9 H, C(O)C(CH3)3).
13C NMR (100 MHz, CDCl3): δ = 175.91, 148.75, 135.75, 131.35, 127.04, 125.38, 123.86, 120.53, 115.70, 113.92, 84.98, 77.00, 62.09, 43.68, 38.65, 28.04 (3C), 27.02 (3C).
MS (ESI): m/z = 456/454 [M + H]+, 354/352 [M – (CH3)3CO2H + H]+.
Anal. Calcd for C21H28ClN3O6: C, 55.57; H, 6.22; N, 9.26. Found: C, 55.69; H, 6.28; N, 9.21.
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1-Acetyl-3-{1-[(pivaloyloxy)(methyl)amino]-2-nitroethyl}-1H-indole (7h)
Yield: 1.11 g (88%); light-orange solid; mp 84–85 °C (hexane); Rf = 0.15 (EtOAc–hexane, 1:8).
IR (film): 2973, 2937, 2910, 2874, 1753 s (CO), 1715 s (CO), 1553, 1451, 1386, 1313, 1225, 1125, 1077, 1023, 939, 755, 672, 641, 564 cm–1.
1H NMR (600 MHz, CDCl3): δ = 8.44 (br d, J = 8.3 Hz, 1 H), 7.83 (d, J = 7.4 Hz, 1 H), 7.55 (s, 1 H), 7.38–7.43 (m, 1 H), 7.32–7.37 (m, 1 H), 5.07 (dd, J = 7.4, 5.8 Hz, 1 H, CHCHaHb), 4.98 (dd, J = 12.8, 7.4 Hz, 1 H, CHCHa H b), 4.66 (dd, J = 12.8, 5.8 Hz, 1 H, CHCH aHb), 2.70 (s, 3 H, C(O)CH3 or NCH3), 2.66 (s, 3 H, C(O)CH3 or NCH3), 1.25 (s, 9 H, C(O)C(CH3)3).
13C NMR (100 MHz, CDCl3): δ = 175.98, 168.27, 135.76, 128.36, 126.16, 124.28, 124.22, 119.58, 116.69, 116.11, 77.14, 62.39, 44.09, 38.68, 27.00 (3C), 23.92.
MS (ESI): m/z = 362 [M + H]+, 260 [M – (CH3)3CO2H + H]+.
Anal. Calcd for C18H23N3O5: C, 59.82; H, 6.41; N, 11.63. Found: C, 60.00; H, 6.48; N, 11.58.
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Catalytic Hydrogenation of Adduct 11
To a solution of adduct 11 (0.54 g, 1.1 mmol) in MeOH (10 mL) was added AcOH (9.5 mL, 1.165 mol) and 5% Pd on charcoal (0.05 g) and the mixture was purged with hydrogen. The mixture was vigorously stirred under a hydrogen atmosphere (1 atm) for 18 h, filtered, and concentrated in vacuo. The residue was dissolved in CH2Cl2 (50 mL), treated with cold NaOH solution (10%, 40 mL) and concd NaCl solutions (20 mL), and dried over anhydrous Na2SO4. The solvent was removed in vacuo and the residue was purified by chromatography on a column of silica gel (CHCl3–MeOH–NH3(aq), 100:10:0.2) to afford diamine 7b (0.206 g, 68 %). Its characteristics correspond to the sample obtained from adduct 9a (see below).
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Reduction of Adduct 11 with Zn Dust
To a solution of adduct 11 (0.54 g, 1.1 mmol) in MeOH (10 mL) was added AcOH (9.5 mL, 1.165 mol) and Zn dust (1.44 g, 22 mmol). The mixture was vigorously stirred at r.t. for 2 h, and then another portion of Zn dust (1.43 g, 22 mmol) was added. The resulting mixture was vigorously stirred further for 12 h, filtered, and concentrated in vacuo. The residue was dissolved in CH2Cl2 (100 mL), treated with chipped ice (10 g), and carefully shaken with cold NaOH solution (10%, 90 mL). The organic layer was separated and washed with cold NaOH (10%, 30 mL) and concd NaCl solutions (20 mL), and dried over anhydrous Na2SO4. The solvent was removed in vacuo and the residue was purified by chromatography on a column of silica gel with gradient of MeOH in CHCl3 to afford compound 12.
Yield: 0.27 g (53%); pale-yellow oil.
IR (film): 3378 br, 2978, 2931, 2866, 1736 s, (CO), 1603, 1451, 1371, 1256, 1155, 1054, 842, 803, 750, 698, 611 cm–1.
1H NMR (600 MHz, CDCl3): δ = 8.03 (m, 1 H), 7.81 (d, J = 1.8 Hz, 1 H), 7.55 (s, 1 H), 7.41 (dd, J = 8.8, 1.8 Hz, 1 H), 7.28–7.36 (m, 5 H, Ph), 6.02 (br s, 1 H, NH), 4.64–4.70 (m, 2 H, CH 2Ph), 4.19–4.24 (m, 1 H, CHCH2), 3.07–3.13 (m, 2 H, CHCH 2), 1.67 (s, 9 H, OC(CH3)3), 1.47 (br s, 2 H, NH2).
13C NMR (150 MHz, CDCl3): δ = 149.20, 137.62, 134.28, 131.10, 128.54, 128.31, 127.85, 127.33, 124.77, 122.60, 118.24, 116.70, 115.90, 84.18, 76.73, 59.96, 43.26, 28.12 (3C).
MS (ESI): m/z = 462/460 [M + H]+.
Anal. Calcd for C22H26BrN3O3: C, 57.40; H, 5.69; N, 9.13. Found: C, 57.37; H, 5.61; N, 9.04.
After the chromatography, diamine 7b (5.8 mg, 15%) was also isolated. The analytical data was in accordance with the characteristics of the sample obtained from adduct 9b (see below).
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Synthesis of (Indol-3-yl)ethane-1,2-diamines 6; General Procedure A
A solution of adduct 7 (2.2 mmol) in EtOAc (8.3 mL) was added to a cooled (–10 °C) mixture of MeOH (16.5 mL) and HBr (40%, 5.5 mL, 37.8 mmol) under vigorous stirring and treated with Zn dust (2.2 g, 33 mmol). The reaction mixture was allowed to warm to 0–5 °C (1 h), stirred at that temperature for 1 h, and filtered. The precipitate was filtered off and rinsed with a small amount of MeOH. The filtrate was diluted with CH2Cl2 (100 mL), treated with crushed ice (10 g), and carefully shaken with cold NaOH solution (10%, 90 mL). The organic layer was separated and the aqueous layer was washed with CH2Cl2 (20 mL). The combined organic extracts were washed with cold NaOH (10%, 30 mL) and concd NaCl solutions (20 mL), and dried over anhydrous Na2SO4. The solvent was removed in vacuo to afford target diamine 6 as a yellowish oil. The product was pure enough for further syntheses. Chromatographic purification on a column with silica gel (CHCl3–MeOH–NH3(aq), 100:10:0.2) was performed, if necessary.
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Synthesis of (Indol-3-yl)ethane-1,2-diamines 6; General Procedure B
A solution of adduct 7 (2.2 mmol) in EtOAc (13 mL) was added to a cooled (–10 °C) mixture of MeOH (26 mL) and HBr (40%, 13 mL, 89.0 mmol) under vigorous stirring and treated with Zn dust (1.44 g, 22 mmol). The mixture was allowed to warm to 0 °C (1 h), then another portion of Zn dust (1.44 g, 22 mmol) was added. The reaction mixture was stirred further at 0–5 °C for 5 h, and filtered. The precipitate was rinsed with a small amount of MeOH and the filtrate was diluted with CH2Cl2 (100 mL), treated with crushed ice (10 g), and shaken carefully with cold NaOH solution (10%, 120 mL). General Procedure A was then followed.
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1-[(1-tert-Butoxycarbonyl)-1H-indol-3-yl]ethane-1,2-diamine (6a)
Obtained by following General Procedure A.
Yield: 0.51 g (84%); pale-yellow viscous oil; Rf = 0.30 (CHCl3–MeOH–NH3(aq), 10:1:0.02).
IR (film): 3365 br, 2978, 2932, 2868, 1729 s (CO), 1606, 1555, 1453, 1375, 1256, 1158, 1079, 856, 747, 591 cm–1.
1H NMR (400 MHz, CDCl3): δ = 8.16 (d, J = 8.2 Hz, 1 H, 7-H), 7.61 (d, J = 7.8 Hz, 1 H, 4-H), 7.54 (s, 1 H, 2-H), 7.32 (dd, J = 8.2, 7.1 Hz, 1 H, 6-H), 7.23 (dd, J = 7.8, 7.1 Hz, 1 H, 5-H), 4.23 (dd J = 6.6, 4.5 Hz, 1 H, CHCHaHb), 3.10 (dd, J = 12.7, 4.5 Hz, 1 H, CHCHa H b), 2.94 (dd, J = 12.7, 6.6 Hz, 1 H, CHCH aHb), 1.67 (s, 9 H, OC(CH3)3), 1.58 (br s, 4 H, 2NH2).
13C NMR (100 MHz, CDCl3): δ = 149.59, 135.74, 128.83, 124.43, 123.34, 122.39, 122.31, 119.17, 115.34, 83.57, 50.51, 47.94, 28.09.
MS (ESI): m/z = 276 [M + H]+, 259 [M – NH3 +H]+.
Anal. Calcd for C15H21N3O2: C, 65.43; H, 7.69; N, 15.26. Found: C, 65.33; H, 7.73; N, 15.15.
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1-[5-Bromo-(1-tert-Butoxycarbonyl)-1H-indol-3-yl]ethane-1,2-diamine (6b)
Obtained by following General Procedure A.
Yield: 0.75 g (95%); pale-yellow viscous oil; Rf = 0.35 (CHCl3–MeOH–NH3(aq), 10:1:0.02).
IR (film): 3368 br, 2979, 2933, 2867, 1733 s (CO), 1601, 1450, 1372, 1276, 1255, 1157, 1055, 842, 801, 765, 636 cm–1.
1H NMR (400 MHz, CDCl3): δ = 8.02 (d, J = 8.8 Hz, 1 H, 7-H), 7.76 (d, J = 2.0 Hz, 1 H, 4-H), 7.54 (s, 1 H, 2-H), 7.39 (dd, J = 8.8, 2.0 Hz, 1 H, 6-H), 4.18 (dd J = 7.0, 4.7 Hz, 1 H, CHCHaHb), 3.09 (dd, J = 12.7, 4.7 Hz, 1 H, CHCHa H b), 2.91 (dd, J = 12.7, 7.0 Hz, 1 H, CHCH aHb), 1.67 (br s, 4 H, 2NH2), 1.66 (s, 9 H, OC(CH3)3).
13C NMR (100 MHz, CDCl3): δ = 149.29, 134.60, 130.69, 127.29, 123.54, 122.82, 122.11, 116.83, 115.84, 84.08, 50.55, 48.13, 28.14 (3C).
MS (ESI): m/z = 356/354 [M + H]+, 339/337 [M – NH3 + H]+.
Anal. Calcd for C15H20BrN3O2: C, 50.86; H, 5.69; N, 11.86. Found: C, 50.80; H, 5.75; N, 11.79.
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1-[(1-tert-Butoxycarbonyl)-1H-indol-3-yl]-N 1-methylethane-1,2-diamine (6c)
Obtained by following General Procedure B.
Yield: 0.59 g (93%); pale-yellow viscous oil; Rf = 0.34 (CHCl3–MeOH–NH3(aq), 10:1:0.02).
IR (film): 3366 br, 2976, 2932, 2794, 1728 s (CO), 1607, 1450, 1367, 1250, 1152, 1078, 1017, 854, 743, 665 cm–1.
1H NMR (400 MHz, CDCl3): δ = 8.17 (d, J = 8.0 Hz, 1 H, 7-H), 7.66 (d, J = 7.7 Hz, 1 H, 4-H), 7.53 (s, 1 H, 2-H), 7.33 (dd, J = 8.0, 7.4 Hz, 1 H, 6-H), 7.23 (dd, J = 7.7, 7.4 Hz, 1 H, 5-H), 3.83 (dd J = 6.4, 5.4 Hz, 1 H, CHCHaHb), 3.10 (dd, J = 12.7, 5.4 Hz, 1 H, CHCHa H b), 2.98 (dd, J = 12.7, 6.4 Hz, 1 H, CHCH aHb), 2.43 (s, 3 H, NCH3), 1.68 (s, 9 H, OC(CH3)3), 1.43 (br s, 3 H, NH + NH2).
13C NMR (100 MHz, CDCl3): δ = 149.48, 135.68, 129.27, 124.25, 123.12, 122.23, 120.92, 119.33, 115.19, 83.39, 59.72, 46.04, 34.45, 28.00 (3C).
MS (ESI): m/z = 290 [M + H]+.
Anal. Calcd for C16H23N3O2: C, 66.41; H, 8.01; N, 14.52. Found: C, 66.33; H, 8.06; N, 14.45.
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1-[5-Bromo-(1-tert-butoxycarbonyl)-1H-indol-3-yl]-N 1-methylethane-1,2-diamine (6d)
Obtained by following General Procedure B.
Yield: 0.70 g (86%); pale-yellow viscous oil; Rf = 0.46 (CHCl3–MeOH–NH3(aq), 10:1:0.02).
IR (film): 3326 br, 2934, 2791, 1733 s (CO), 1602, 1449, 1373, 1275, 1256, 1156, 1055, 802, 732, 640, 611 cm–1.
1H NMR (400 MHz, CDCl3): δ = 8.01 (d, J = 8.7 Hz, 1 H, 7-H), 7.81 (d, J = 1.9 Hz, 1 H, 4-H), 7.52 (s, 1 H, 2-H), 7.37 (dd, J = 8.7, 1.9 Hz, 1 H, 6-H), 3.76 (dd J = 6.7, 5.3 Hz, 1 H, CHCHaHb), 3.06 (dd, J = 12.8, 5.3 Hz, 1 H, CHCHa H b), 2.93 (dd, J = 12.8, 6.7 Hz, 1 H, CHCH aHb), 2.39 (s, 3 H, NCH3), 1.69 (br s, 3 H, NH + NH2), 1.64 (s, 9 H, OC(CH3)3).
13C NMR (100 MHz, CDCl3): δ = 149.19, 134.55, 131.07, 127.18, 124.42, 122.24, 120.28, 116.71, 115.77, 84.01, 59.62, 46.05, 34.42, 28.07 (3C).
MS (ESI): m/z = 370/368 [M + H]+.
Anal. Calcd for C16H22BrN3O2: C, 52.18; H, 6.02; N, 11.41. Found: C, 52.20; H, 6.06; N, 11.34.
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1-[6-Bromo-(1-tert-butoxycarbonyl)-1H-indol-3-yl]-N 1-methylethane-1,2-diamine (6e)
Obtained by following General Procedure B.
Yield: 0.74 g (92%); pale-yellow viscous oil; Rf = 0.31 (CHCl3–MeOH–NH3(aq), 10:1:0.02).
IR (film): 3320 br, 2977, 2935, 2792, 1736 s (CO), 1602, 1453, 1432, 1370, 1251, 1156, 1082, 810, 766, 590 cm–1.
1H NMR (400 MHz, CDCl3): δ = 8.37 (br s, 1 H, 7-H), 7.55 (d, J = 8.4 Hz, 1 H, 4-H), 7.50 (s, 1 H, 2-H), 7.33 (dd, J = 8.4, 1.7 Hz, 1 H, 5-H), 3.81 (dd J = 6.8, 5.3 Hz, 1 H, CHCHaHb), 3.08 (dd, J = 12.8, 5.3 Hz, 1 H, CHCHa H b), 2.96 (dd, J = 12.8, 6.8 Hz, 1 H, CHCH aHb), 2.41 (s, 3 H, NCH3), 1.76 (br s, 3 H, NH + NH2), 1.67 (s, 9 H, OC(CH3)3).
13C NMR (100 MHz, CDCl3): δ = 149.23, 136.56, 128.20, 125.69, 123.79, 120.75, 120.69, 118.59, 118.25, 84.23, 59.65, 46.11, 34.43, 28.12 (3C).
MS (ESI): m/z = 370/368 [M + H]+.
Anal. Calcd for C16H22BrN3O2: C, 52.18; H, 6.02; N, 11.41. Found: C, 52.27; H, 6.07; N, 11.30.
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1-[5-Methoxy-(1-tert-butoxycarbonyl)-1H-indol-3-yl]-N 1-methylethane-1,2-diamine (6f)
Obtained by following General Procedure B.
Yield: 0.53 g (75%); pale-yellow viscous oil; Rf = 0.34 (CHCl3–MeOH–NH3(aq), 10:1:0.02).
IR (film): 3325 br, 2976, 2836, 2794, 1730 s (CO), 1612, 1477, 1449, 1385, 1256, 1159, 1074, 855, 803, 732, 656 cm–1.
1H NMR (400 MHz, CDCl3): δ = 8.02 (d, J = 9.0 Hz, 1 H, 7-H), 7.51 (s, 1 H, 2-H), 7.12 (d, J = 2.5 Hz, 1 H, 4-H), 6.92 (dd, J = 9.0, 2.5 Hz, 1 H, 6-H), 3.84 (s, 3 H, OCH3), 3.81 (dd J = 6.5, 5.5 Hz, 1 H, CHCHaHb), 3.09 (dd, J = 12.9, 5.5 Hz, 1 H, CHCHa H b), 2.97 (dd, J = 12.9, 6.5 Hz, 1 H, CHCH aHb), 2.42 (s, 3 H, NCH3), 1.91 (br s, 3 H, NH + NH2), 1.65 (s, 9 H, OC(CH3)3).
13C NMR (100 MHz, CDCl3): δ = 155.68, 149.53, 130.52, 130.17, 123.99, 120.33, 115.99, 112.89, 102.46, 83.42, 59.54, 55.73, 45.85, 34.32, 28.13 (3C).
MS (ESI): m/z = 320 [M + H]+.
Anal. Calcd for C17H25N3O3: C, 63.93; H, 7.89; N, 13.16. Found: C, 63.81; H, 7.96; N, 13.10.
#
1-[6-Chloro-(1-tert-butoxycarbonyl)-1H-indol-3-yl]-N 1-methylethane-1,2-diamine (6g)
Obtained by following General Procedure B.
Yield: 0.655 g (92%); pale-yellow viscous oil; Rf = 0.32 (CHCl3–MeOH–NH3(aq), 10:1:0.02).
IR (film): 3366 br, 2978, 2937, 2796, 1737 s (CO), 1606, 1435, 1455, 1371, 1252, 11576, 1087, 812, 767, 733, 595 cm–1.
1H NMR (400 MHz, CDCl3): δ = 8.18 (br s, 1 H, 7-H), 7.57 (d, J = 8.3 Hz, 1 H, 4-H), 7.50 (s, 1 H, 2-H), 7.16 (dd, J = 8.3, 2.0 Hz, 1 H, 5-H), 3.80 (dd J = 6.7, 5.3 Hz, 1 H, CHCHaHb), 3.06 (dd, J = 12.8, 5.3 Hz, 1 H, CHCHa H b), 2.94 (dd, J = 12.8, 6.7 Hz, 1 H, CHCH aHb), 2.38 (s, 3 H, NCH3), 2.01 (br s, 3 H, NH + NH2), 1.64 (s, 9 H, OC(CH3)3).
13C NMR (100 MHz, CDCl3): δ = 149.24, 136.24, 130.48, 127.83, 123.91, 123.01, 120.61, 120.33, 115.67, 84.21, 59.46, 45.99, 34.37, 28.12 (3C).
MS (ESI): m/z = 326/324 [M + H]+.
Anal. Calcd for C16H22ClN3O2: C, 59.35; H, 6.85; N, 12.98. Found: C, 59.27; H, 6.90; N, 12.91.
#
tert-Butyl 6-Bromo-3-{2-[(6-bromo-1H-indol-3-yl)carbonyl]-1-methyl-4,5-dihydro-1H-imidazol-5-yl}-1H-indole-1-carboxylate (16a)
A solution of 3-acetyl-6-bromoindole (0.2 g, 0.84 mmol) and I2 (0.23 g, 0.92 mmol) in DMSO (1.7 mL) was heated for 2 h at 100 °C. The reaction mixture was cooled to 0–5 °C then treated with NaHCO3 (0.08 g, 0.92 mmol) and a solution of diamine 6e (0.32 g, 0.86 mmol) in MeCN (8.5 mL). After stirring for 0.5 h the reaction mixture was treated with NCS (0.11 g, 0.86 mmol) under cooling (0–5 °C), stirred for 20 min, and left to stand overnight. The reaction mixture was diluted with CHCl3 (50 mL), washed with saturated NaHCO3 (30 mL) and Na2S2O3 (30 mL) solutions, H2O (5 × 30 mL), and concd NaCl solution (30 mL), and dried over anhydrous Na2SO4. The solvent was removed in vacuo and the solid was purified by chromatography on a column with silica gel (СHCl3–MeOH, 100:1) to provide the title compound.
Yield: 0.388 g (77%); brownish amorphous solid; Rf = 0.53 (СHCl3–MeOH, 40:1).
IR (film): 3119, 2978, 2869, 1742 s (CO), 1630, 1574, 1434, 1369, 1249, 1155, 1086, 980, 810, 689, 591 cm–1.
1H NMR (500 MHz, CDCl3): δ = 12.14 (br s, 1 H, NH), 8.41 (br s, 1 H), 8.17 (d, J = 8.2 Hz, 1 H), 7.98 (s, 1 H), 7.62 (s, 1 H), 7.44 (s, 1 H), 7.29–7.41 (m, 3 H), 4.91 (dd J = 12.2, 10.4 Hz, 1 H, CHCHaHb), 4.17 (dd, J = 14.4, 12.2 Hz, 1 H, CHCHa H b), 3.80 (dd, J = 14.4, 10.4 Hz, 1 H, CHCH aHb), 2.81 (s, 3 H, NCH3), 1.70 (s, 9 H, OC(CH3)3).
13C NMR (100 MHz, CDCl3): δ = 180.54, 163.28, 149.06, 137.87, 137.63, 136.93, 126.62, 126.42 (2C), 124.88, 124.57, 123.46, 120.55, 118.96, 118.93, 118.39, 117.63, 115.60, 115.24, 84.82, 61.00, 58.76, 31.86, 28.16 (3C).
MS (ESI): m/z = 602/601/600 [M + H]+.
Anal. Calcd for C26H24Br2N4O3: C, 52.02; H, 4.03; N, 9.33. Found: C, 52.21; H, 4.11; N, 9.21.
#
tert-Butyl 3-[2-(1H-Indol-3-ylcarbonyl)-1-methyl-4,5-dihydro-1H-imidazol-5-yl]-1H-indole-1-carboxylate (16b)
The compound was prepared as described above for 16a.
Yield: 0.290 (79%); light-brown amorphous solid; Rf = 0.46 (СHCl3–MeOH, 40:1).
IR (film): 3105 br, 2979, 2932, 1737 s (CO), 1640, 1607, 1514, 1451, 1369, 1240, 1154, 1091, 749, 589 cm–1.
1H NMR (400 MHz, CDCl3): δ = 12.40 (br s, 1 H, NH), 8.42 (d, J = 7.9 Hz, 1 H), 8.21 (d, J = 8.3 Hz, 1 H), 7.88 (s, 1 H), 7.58–7.67 (m, 2 H), 7.34–7.41 (m, 1 H), 7.20–7.29 (m, 3 H), 7.13–7.19 (m, 1 H), 4.82 (dd J = 11.6, 10.6 Hz, 1 H, CHCHaHb), 4.15 (dd, J = 14.5, 11.6 Hz, 1 H, CHCHa H b), 3.88 (dd, J = 14.5, 10.6 Hz, 1 H, CHCH aHb), 2.83 (s, 3 H, NCH3), 1.72 (s, 9 H, OC(CH3)3).
13C NMR (100 MHz, CDCl3): δ = 180.93, 163.58, 149.51, 137.72, 137.20, 136.18, 127.99, 125.79, 124.95, 124.30, 123.97, 123.08, 123.05, 122.16, 119.58, 118.71, 115.69, 115.58, 112.29, 84.13, 61.08, 58.78, 31.86, 28.19 (3C).
MS (ESI): m/z = 443 [M + H]+.
Anal. Calcd for C26H26N4O3: C, 70.57; H, 5.92; N, 12.66. Found: C, 70.41; H, 5.84; N, 12.55.
#
tert-Butyl 6-Bromo-3-[5-(6-bromo-1H-indol-3-yl)-1-methyl-6-oxo-1,2,3,6-tetrahydropyrazin-2-yl]-1H-indole-1-carboxylate (22a)
A solution of diamine 6e (0.26 g, 0.70 mmol) in EtOH (2.6 mL) at 0–5 °C was treated portionwise with acid chloride 18a (0.20 g, 0.7 mmol) over a period of 10 min and stirred for 15 min at r.t. Anhydrous AcONa (57.4 mg, 0.7 mmol) and AcOH (0.26 mL) were then added and the reaction mixture was heated at reflux for 1.5 h. After cooling, the mixture was diluted with EtOAc (25 mL), washed with saturated NaHCO3 (20 mL) and concd NaCl (10 mL) solutions, and dried over anhydrous Na2SO4. The solvent was removed in vacuo and the residue was purified by chromatography on a column with silica gel (toluene–EtOAc, 3:1) to provide the title compound.
Yield: 0.302 g (72%); pale-yellow amorphous solid; Rf = 0.49 (toluene–EtOAc, 2:1).
IR (film): 3151 br, 2976, 2932, 1740 s (CO), 1650, 1590, 1434, 1369, 1252, 1154, 1088, 809, 766, 731, 589 cm–1.
1H NMR (600 MHz, CDCl3): δ = 8.89 (br s, 1 H, NH), 8.47 (d, J = 2.6 Hz, 1 H), 8.35 (br s, 1 H), 8.27 (d, J = 8.8 Hz, 1 H), 7.54 (d, J = 1.8 Hz, 1 H), 7.45 (d, J = 8.4 Hz, 1 H), 7.42 (br s, 1 H), 7.40 (dd, J = 8.4, 1.8 Hz, 1 H), 7.28 (dd, J = 8.8, 1.8 Hz, 1 H), 4.96 (dd J = 5.9, 5.5 Hz, 1 H, CHCHaHb), 4.38 (dd, J = 16.5, 5.9 Hz, 1 H, CHCHa H b), 4.31 (dd, J = 16.5, 5.5 Hz, 1 H, CHCH aHb), 3.10 (s, 3 H, NCH3), 1.60 (s, 9 H, OC(CH3)3).
13C NMR (125 MHz, CDCl3): δ = 157.84, 157.21, 148.91, 136.90, 136.52, 131.99, 127.18, 126.25, 125.22, 124.65, 124.54, 124.10, 119.98, 118.94, 118.79, 117.00, 116.40, 114.11, 112.13, 84.90, 53.31, 51.87, 33.00, 28.00 (3C).
MS (ESI): m/z = 602/601/600 [M + H]+.
Anal. Calcd for C26H24Br2N4O3: C, 52.02; H, 4.03; N, 9.33. Found: C, 52.24; H, 4.11; N, 9.24.
#
tert-Butyl 3-[5-(1H-Indol-3-yl)-1-methyl-6-oxo-1,2,3,6-tetrahydropyrazin-2-yl]-1H-indole-1-carboxylate (22b)
The compound was prepared as described for 22a.
Yield: 0.214 g (69 %); light-brown amorphous solid; Rf = 0.45 (toluene–EtOAc, 2:1).
IR (film): 3270 br, 2976, 2931, 1736 s (CO), 1650, 1590, 1453, 1371, 1310, 1256, 1155, 1088, 852, 746, 591 cm–1.
1H NMR (400 MHz, CDCl3): δ = 8.88 (br s, 1 H, NH), 8.54 (d, J = 2.6 Hz, 1 H), 8.43 (d, J = 8.7 Hz, 1 H), 8.14 (d, J = 8.0 Hz, 1 H), 7.61 (d, J = 7.7 Hz, 1 H), 7.45 (s, 1 H), 7.33–7.42 (m, 2 H), 7.25–7.31 (m, 1 H), 7.17–7.25 (m, 2 H), 4.98 (dd, J = 5.9, 5.4 Hz, 1 H, CHCHaHb), 4.46 (dd, J = 16.5, 5.9 Hz, 1 H, CHCHa H b), 4.31 (dd, J = 16.5, 5.4 Hz, 1 H, CHCH aHb), 3.13 (s, 3 H, NCH3), 1.60 (s, 9 H, OC(CH3)3).
13C NMR (100 MHz, CDCl3): δ = 158.07, 157.29, 149.36, 136.09, 135.87, 132.13, 128.44, 126.23, 124.93, 124.18, 122.94 (2C), 122.70, 121.57, 118.93, 117.00, 115.67, 111.94, 111.19, 84.20, 53.45, 51.63, 32.96, 28.06 (3C).
MS (ESI): m/z = 443 [M + H]+.
Anal. Calcd for C26H26N4O3: C, 70.57; H, 5.92; N, 12.66. Found: C, 70.71; H, 5.99; N, 12.60.
#
Removal of the Boc Protecting Group; General Procedure
A suspension of the substrate (0.43 mmol) in CH2Cl2 (2 mL) at 0–5 °C was treated with TFA (0.4 mL, 5.2 mmol) in four portions, stirred at the same temperature for 20 min, left overnight, and evaporated in vacuo. The residue was dissolved in EtOAc (40 mL), washed with saturated NaHCO3 (2 × 20 mL) and concd NaCl (20 mL) solutions, and dried over anhydrous Na2SO4. The solvent was removed in vacuo and the residue was purified by chromatography on a column with silica gel.
#
(6-Bromo-1H-indol-3-yl)[5-(6-bromo-1H-indol-3-yl)-1-methyl-4,5-dihydro-1H-imidazol-2-yl]methanone (5a)
Yield: 0.210 g (98%); light-beige solid; mp 247–249 °C (dec.) (EtOAc); Rf = 0.36 (CHCl3–MeOH, 20:1).
IR (film): 3426, 3119, 3012, 2850, 1637, 1569, 1513, 1450, 1265, 1085, 986, 822, 793, 692, 600 cm–1.
1H NMR (400 MHz, DMSO-d 6): δ = 12.30 (br s, 1 H, 1′-NH), 11.20 (br s, 1 H, 1′′-NH), 8.51 (s, 1 H, 2′-H), 8.17 (d, J = 8.4 Hz, 1 H, 4′-H), 7.74 (d, J = 1.6 Hz, 1 H, 7′-H), 7.59 (d, J = 1.6 Hz, 1 H, 7′′-H), 7.53 (d, J = 8.4 Hz, 1 H, 4′′-H), 7.45 (d, J = 2.4 Hz, 1 H, 2′′-H), 7.40 (dd, J = 8.4, 1.6 Hz, 1 H, 5′-H), 7.14 (dd, J = 8.4, 1.6 Hz, 1 H, 5′′-H), 4.86 (dd J = 11.2, 10.3 Hz, 1 H, CHCHaHb), 4.26 (dd, J = 15.1, 11.2 Hz, 1 H, CHCHa H b), 3.80 (dd, J = 15.1, 10.3 Hz, 1 H, CHCH aHb), 2.67 (s, 3 H, NCH3).
13C NMR (100 MHz, DMSO-d 6): δ = 182.24, 162.09, 139.09, 137.80, 137.60, 125.27 (2C), 124.65, 124.43, 122.90, 121.67, 120.56, 115.82, 115.23, 114.80, 114.40, 114.13, 113.88, 60.54 (2C), 31.69.
1H NMR (400 MHz, acetone-d 6): δ = 11.37 (br s, 1 H, 1′-NH), 10.42 (br s, 1 H, 1′′-NH), 8.68 (s, 1 H, 2′-H), 8.32 (d, J = 8.5 Hz, 1 H, 4′-H), 7.76 (d, J = 1.6 Hz, 1 H, 7′-H), 7.65 (d, J = 1.6 Hz, 1 H, 7′′-H), 7.63 (d, J = 8.5 Hz, 1 H, 4′′-H), 7.45 (d, J = 2.1 Hz, 1 H, 2′′-H), 7.41 (dd, J = 8.5, 1.7 Hz, 1 H, 5′-H), 7.17 (dd, J = 8.5, 1.7 Hz, 1 H, 5′′-H), 4.90 (dd J = 11.3, 10.3 Hz, 1 H, CHCHaHb), 4.31 (dd, J = 15.3, 11.3 Hz, 1 H, CHCHa H b), 3.91 (dd, J = 15.3, 10.3 Hz, 1 H, CHCH aHb), 2.82 (s, 3 H, NCH3).
13C NMR (100 MHz, acetone-d 6): δ = 183.28, 163.42, 139.61, 139.36, 138.78, 126.40, 126.31, 125.93, 125.78, 124.34, 123.13, 121.83, 117.27, 116.72, 116.13, 115.88, 115.83, 115.59, 62.40, 61.88, 32.51.
MS (ESI): m/z = 502/501/500 [M + H]+.
Anal. Calcd for C21H16Br2N4O: C, 50.43; H, 3.22; N, 11.20. Found: C, 50.49; H, 3.26; N, 11.18.
#
1H-Indol-3-yl[5-(1H-indol-3-yl)-1-methyl-4,5-dihydro-1H-imidazol-2-yl]methanone (5b)
Yield: 0.139 g (94%); light-brown amorphous solid; Rf = 0.33 (CHCl3–MeOH, 20:1).
IR (film): 3360 br, 3059, 2919, 1620, 1580, 1518, 1442, 1241, 1085, 977, 858, 743, 642 cm–1.
1H NMR (400 MHz, DMSO-d 6): δ = 12.22 (br s, 1 H, 1′-NH), 11.08 (br s, 1 H, 1′′-NH), 8.50 (s, 1 H), 8.24–8.29 (m, 1 H), 7.61 (d, J = 8.0 Hz, 1 H), 7.52–7.58 (m, 1 H), 7.37–7.44 (m, 2 H), 7.22–7.32 (m, 2 H), 7.08–7.15 (m, 1 H), 6.97–7.04 (m, 1 H), 4.88 (dd J = 11.3, 10.2 Hz, 1 H, CHCHaHb), 4.26 (dd, J = 14.8, 11.3 Hz, 1 H, CHCHa H b), 3.86 (dd, J = 14.8, 10.2 Hz, 1 H, CHCH aHb), 2.68 (s, 3 H, NCH3).
13C NMR (100 MHz, DMSO-d 6): δ = 182.32, 162.48, 138.42, 137.02, 137.79, 125.62, 125.50, 124.34, 123.46, 122.52, 121.36 (2C), 118.94, 118.83, 115.01, 113.41, 112.60, 111.92, 60.83, 60.36, 31.73.
MS (ESI): m/z = 343 [M + H]+.
Anal. Calcd for C21H18N4O: C, 73.67; H, 5.30; N, 16.36. Found: C, 73.48; H, 5.23; N, 16.28.
#
Topsentin C (17a)
Yield: 0.214 g (99%); pale-yellow solid; mp 179–181 °C (dec.) (i-PrOH); Rf = 0.18 (CHCl3).
IR (film): 3404, 3208, 2924, 2853, 1647, 1592, 1524, 1440, 1397, 1340, 1290, 1231, 1111, 1049, 947, 895, 852, 793, 734, 647, 570 cm–1.
1H NMR (400 MHz, DMSO-d 6): δ = 11.62 (br s, 1 H, 1′-NH), 11.14 (br s, 1 H, 1′′-NH), 8.46 (d, J = 2.4 Hz, 1 H, 2′-H), 8.22 (d, J = 8.6 Hz, 1 H, 4′-H), 7.49–7.71 (m, 3 H, 7′-H + 7′′-H + 4′′-H), 7.03–7.25 (m, 3 H, 2′′-H + 5′-H + 5′′-H), 5.11 (dd, J = 5.3, 4.8 Hz, 1 H, CHCHaHb), 4.29 (dd, J = 16.5, 4.8 Hz, 1 H, CHCHa H b), 4.18 (dd, J = 16.5, 5.3 Hz, 1 H, CHCH aHb), 2.97 (s, 3 H, NCH3).
13C NMR (100 MHz, DMSO-d 6): δ = 157.08, 156.69, 137.42, 137.04, 132.77, 125.09, 124.64, 124.52, 124.10, 123.21, 121.83, 120.33, 114.70, 114.35, 114.20 (2C), 112.12, 111.02, 52.46, 52.28, 32.36.
1H NMR (400 MHz, acetone-d 6): δ = 10.70 (br s, 1 H, 1′-NH), 10.34 (br s, 1 H, 1′′-NH), 8.62 (d, J = 2.75 Hz, 1 H, 2′-H), 8.37 (d, J = 8.6 Hz, 1 H, 4′-H), 7.69 (d, J = 8.6 Hz, 1 H, 4′′-H), 7.66 (d, J = 1.8 Hz, 1 H, 7′-H), 7.63 (d, J = 1.7 Hz, 1 H, 7′′-H), 7.17–7.23 (m, 3 H, 2′′-H + 5′-H + 5′′-H), 5.15 (dd J = 5.5, 5.2 Hz, 1 H, CHCHaHb), 4.41 (dd, J = 16.5, 5.2 Hz, 1 H, CHCHa H b), 4.26 (dd, J = 16.5, 5.5 Hz, 1 H, CHCH aHb), 3.04 (s, 3 H, NCH3).
13C NMR (100 MHz, acetone-d 6): δ = 158.47, 158.06, 138.86, 138.34, 133.67, 126.67, 126.07, 125.49, 125.39, 124.40, 123.30, 121.19, 116.17, 115.82, 115.53, 115.09, 113.93, 113.05, 54.07, 53.54, 32.77.
MS (ESI): m/z = 502/501/500 [M + H]+.
Anal. Calcd for C21H16Br2N4O: C, 50.43; H, 3.22; N, 11.20. Found: C, 50.55; H, 3.25; N, 11.16.
#
3,6-Di-1H-Indol-3-yl-1-methyl-5,6-dihydropyrazin-2(1H)-one (17b)
Yield: 0.141 g (96%); Rf = 0.60 (CHCl3–MeOH, 15:1).
IR (film): 3400, 3271, 3055, 2926, 1644, 1589, 1422, 1339, 1239, 1172, 1100, 1011, 851, 744 cm–1.
1H NMR (600 MHz, DMSO-d 6): δ = 11.53 (br s, 1 H, NH), 11.01 (br s, 1 H, NH), 8.44 (d, J = 3.3 Hz, 1 H), 8.29 (d, J = 8.3 Hz, 1 H), 7.64 (d, J = 8.3 Hz, 1 H), 7.42 (d, J = 8.3 Hz, 1 H), 7.36 (d, J = 8.3 Hz, 1 H), 7.08–7.17 (m, 2 H), 7.07 (d, J = 2.5 Hz, 1 H), 6.98–7.05 (m, 2 H), 5.11 (dd, J = 5.8, 4.9 Hz, 1 H, CHCHaHb), 4.30 (dd, J = 16.5, 4.9 Hz, 1 H, CHCHa H b), 4.19 (dd, J = 16.5, 5.8 Hz, 1 H, CHCH aHb), 2.99 (s, 3 H, NCH3).
13C NMR (125 MHz, DMSO-d 6): δ = 157.43, 157.02, 136.63, 136.17, 132.06, 126.14, 125.73, 123.46, 122.54, 122.07, 121.46, 120.44, 119.09, 118.59, 111.85 (2C), 111.61, 111.06, 52.78, 52.40, 32.47.
MS (ESI): m/z = 343 [M + H]+.
Anal. Calcd for C21H18N4O: C, 73.67; H, 5.30; N, 16.36. Found: C, 73.79; H, 5.34; N, 16.31.
#
#
No conflict of interest has been declared by the author(s).
Acknowledgment
This work was supported by the Ministry of Education and Science of the Russian Federation (Agreement number 02.a03.21.0008) and by RFBR (research project No. 16-03-00190 a).
Supporting Information
- Supporting information for this article is available online at http://dx.doi.org/10.1055/s-0036-1588731.
- Supporting Information
-
References
- 1a Blunt JW, Copp BR, Keyzers RA, Munro MH. G, Prinsep MR. Nat. Prod. Rep. 2015; 32: 116-116
- 1b Newman DJ, Cragg GM. J. Nat. Prod. 2012; 75: 311-311
- 1c Skropeta D. Nat. Prod. Rep. 2008; 25: 1131-1131
- 2 Golantsov NE, Festa AA, Karchava AV, Yurovskaya MA. Chem. Heterocycl. Compd. 2013; 49: 203-203
- 3 Morris SA, Andersen RJ. Tetrahedron 1990; 46: 715-715
- 5a Guinchard X, Vallée Y, Denis J.-N. J. Org. Chem. 2007; 72: 3972-3972
- 5b Guinchard X, Vallée Y, Denis J.-N. Org. Lett. 2007; 9: 3761-3761
- 5c Murai K, Morishita M, Nakatani R, Kubo O, Fujioka H, Kita Y. J. Org. Chem. 2007; 27: 8947-8947
- 5d Mal SM, Bohé L, Achab S. Tetrahedron 2008; 64: 5904-5904
- 5e Miyake FY, Yakushijin K, Horne DA. Org. Lett. 2000; 2: 2121-2121
- 5f Kawasaki I, Katsuma H, Nakayama Y, Yamashita M, Ohta S. Heterocycles 1998; 48: 1887-1887
- 5g Braekman JC, Daloze D, Moussiaux B, Stoller C, Deneubourg F. Pure Appl. Chem. 1989; 61: 509-509
- 5h Tsujii S, Rinehart KL. J. Org. Chem. 1988; 53: 5446-5446
- 6a Kouko T, Matsumura K, Kawasaki T. Tetrahedron 2005; 2309-2309
- 6b Kawasaki T, Kouko T, Totsuka H, Hiramatsu K. Tetrahedron Lett. 2003; 44: 8849-8849
- 6c Miyake FY, Yakushijin K, Horne DA. Org. Lett. 2002; 4: 941-941
- 6d Jiang B, Yang C.-G, Wang J. J. Org. Chem. 2002; 67: 1396-1396
- 6e Jiang B, Yang C.-G, Wang J. J. Org. Chem. 2001; 66: 4865-4865
- 6f Zhang F, Wang B, Prasad P, Capon RJ, Jia Y. Org. Lett. 2015; 17: 1529-1529
- 6g Jackson JJ, Kobayashi H, Steffens SD, Zakarian A. Angew. Chem. Int. Ed. 2015; 54: 9971-9971
- 6h Mandal D, Yamaguchi AD, Yamaguchi J, Itami K. J. Am. Chem. Soc. 2011; 133: 19660-19660
- 6i Tonsiengsom F, Miyake FY, Yakushijin K, Horne DA. Synthesis 2006; 49-49
- 6j Garg NK, Caspi DD, Stoltz BM. J. Am. Chem. Soc. 2005; 127: 5970-5970
- 6k Garg NK, Sarpong R, Stoltz BM. J. Am. Chem. Soc. 2002; 124: 13179-13179
- 6l Yang C.-G, Wang J, Tang X.-X, Jiang B. Tetrahedron: Asymmetry 2002; 13: 383-383
- 6m Kawasaki T, Enoki H, Matsumura K, Ohyama M, Inagawa M, Sakamoto M. Org. Lett. 2000; 2: 3027-3027
- 6n Miyake FY, Yakushijin K, Horne DA. Org. Lett. 2000; 2: 3185-3185
- 6o Whitlock CR, Cava MP. Tetrahedron Lett. 1994; 35: 371-371
- 6p Jiang B, Smallheer JM, Amaral-Ly C, Wuonola MA. J. Org. Chem. 1994; 59: 6823-6823
- 7a Kim A, Kim MJ, Noh TH, Hong J, Liu Y, Wei X, Jung JH. Bioorg. Med. Chem. Lett. 2016; 26: 5013-5013
- 7b Veale CG. L, Zoraghi R, Young RM, Morrison JP, Pretheeban M, Lobb KA, Reiner NE, Andersen RJ, Davies-Coleman MT. J. Nat. Prod. 2015; 78: 355-355
- 7c Pinchuk B, Johannes E, Gul S, Schlosser J, Schaechtele C, Totzke F, Peifer C. Marine Drugs 2013; 11: 3209-3209
- 8 Hequet A, Burchak ON, Jeanty M, Guinchard X, Le Pihive E, Maigre L, Bouhours P, Schneider D, Maurin M, Paris J.-M, Denis J.-N, Jolivalt C. ChemMedChem 2014; 9: 1534-1534
- 9 Bulatova NN, Suvorov NN. Chem. Heterocycl. Compd. 1969; 5: 602-602
- 10 Canoira L, Rodriguez JG, Subirats JB, Escario J.-A, Jimenez I, Martinez-Fernandez AR. Eur. J. Med. Chem. 1989; 24: 39-39
- 11 Mouhtaram M, Jung L, Stambach JF. Tetrahedron 1993; 49: 1391-1391
- 12a Imagawa K, Hata E, Yamada T, Mukaiyama T. Chem. Lett. 1996; 4: 291-291
- 12b O’Donovan DH, Rozas I. Tetrahedron Lett. 2012; 53: 4532-4532
- 13 Robiette R, Tran T.-V, Cordi A, Tinant B, Marchand-Brynaert J. Synthesis 2010; 3138-3138
- 14a Beshara CS, Hall A, Jenkins RL, Jones KL, Jones TC, Killeen NM, Taylor PH, Thomas SP, Tomkinson NC. O. Org. Lett. 2005; 7: 5729-5729
- 14b Smithen DA, Mathews CJ, Tomkinson NC. O. Org. Biomol. Chem. 2012; 10: 3756-3756
- 15a Erdik E. Tetrahedron 2004; 60: 8747-8747
- 15b Grohmann C, Wang H, Glorius F. Org. Lett. 2013; 15: 3014-3014
- 16 Marmer WN, Maerker G. J. Org. Chem. 1972; 37: 3520-3520
- 17 Wang H, Glorius F. Angew. Chem. Int. Ed. 2012; 51: 7318-7318
- 18 Murai K, Takaichi N, Takahara Y, Fukushima S, Fujioka H. Synthesis 2010; 520-520
- 19a Battini N, Padala AK, Mupparapu N, Vishwakarma RA, Ahmed QN. RSC Adv. 2014; 4: 26258-26258
- 19b Xiang J, Wang J, Wang M, Meng X, Wu A. Tetrahedron 2014; 70: 7470-7470
- 20 Gunasekera SP, McCarthy PJ, Kelly-Borges M. J. Nat. Prod. 1994; 57: 1437-1437
- 21 We did not observe the formation of imidazoline derivatives 16a,b in this reaction. It should also be noted that, in our experiments, compound 5a,b did not transform into the corresponding dihydropyrazinone derivatives 17a,b upon heating in protic or aprotic solvents in the presence of acid (AcOH, PTSA, TFA, HCl).
- 22 NMR 1H spectra of natural topsentin C and compound 17a are identical. There are differences in chemical shifts of several low intensity signals of tertiary carbon atoms in the 13C spectra. It is clear that due to the very small amount of isolated topsentin C, background signals or admixtures masked these low peaks in the spectrum of the natural compound.
- 23 Cassel S, Casenave B, Déléris G, Latxague L, Rollin P. Tetrahedron 1998; 54: 8515-8515
For total syntheses of spongotines and topsentins, see:
For total syntheses of hamacanthins and dragmacidins, see:
-
References
- 1a Blunt JW, Copp BR, Keyzers RA, Munro MH. G, Prinsep MR. Nat. Prod. Rep. 2015; 32: 116-116
- 1b Newman DJ, Cragg GM. J. Nat. Prod. 2012; 75: 311-311
- 1c Skropeta D. Nat. Prod. Rep. 2008; 25: 1131-1131
- 2 Golantsov NE, Festa AA, Karchava AV, Yurovskaya MA. Chem. Heterocycl. Compd. 2013; 49: 203-203
- 3 Morris SA, Andersen RJ. Tetrahedron 1990; 46: 715-715
- 5a Guinchard X, Vallée Y, Denis J.-N. J. Org. Chem. 2007; 72: 3972-3972
- 5b Guinchard X, Vallée Y, Denis J.-N. Org. Lett. 2007; 9: 3761-3761
- 5c Murai K, Morishita M, Nakatani R, Kubo O, Fujioka H, Kita Y. J. Org. Chem. 2007; 27: 8947-8947
- 5d Mal SM, Bohé L, Achab S. Tetrahedron 2008; 64: 5904-5904
- 5e Miyake FY, Yakushijin K, Horne DA. Org. Lett. 2000; 2: 2121-2121
- 5f Kawasaki I, Katsuma H, Nakayama Y, Yamashita M, Ohta S. Heterocycles 1998; 48: 1887-1887
- 5g Braekman JC, Daloze D, Moussiaux B, Stoller C, Deneubourg F. Pure Appl. Chem. 1989; 61: 509-509
- 5h Tsujii S, Rinehart KL. J. Org. Chem. 1988; 53: 5446-5446
- 6a Kouko T, Matsumura K, Kawasaki T. Tetrahedron 2005; 2309-2309
- 6b Kawasaki T, Kouko T, Totsuka H, Hiramatsu K. Tetrahedron Lett. 2003; 44: 8849-8849
- 6c Miyake FY, Yakushijin K, Horne DA. Org. Lett. 2002; 4: 941-941
- 6d Jiang B, Yang C.-G, Wang J. J. Org. Chem. 2002; 67: 1396-1396
- 6e Jiang B, Yang C.-G, Wang J. J. Org. Chem. 2001; 66: 4865-4865
- 6f Zhang F, Wang B, Prasad P, Capon RJ, Jia Y. Org. Lett. 2015; 17: 1529-1529
- 6g Jackson JJ, Kobayashi H, Steffens SD, Zakarian A. Angew. Chem. Int. Ed. 2015; 54: 9971-9971
- 6h Mandal D, Yamaguchi AD, Yamaguchi J, Itami K. J. Am. Chem. Soc. 2011; 133: 19660-19660
- 6i Tonsiengsom F, Miyake FY, Yakushijin K, Horne DA. Synthesis 2006; 49-49
- 6j Garg NK, Caspi DD, Stoltz BM. J. Am. Chem. Soc. 2005; 127: 5970-5970
- 6k Garg NK, Sarpong R, Stoltz BM. J. Am. Chem. Soc. 2002; 124: 13179-13179
- 6l Yang C.-G, Wang J, Tang X.-X, Jiang B. Tetrahedron: Asymmetry 2002; 13: 383-383
- 6m Kawasaki T, Enoki H, Matsumura K, Ohyama M, Inagawa M, Sakamoto M. Org. Lett. 2000; 2: 3027-3027
- 6n Miyake FY, Yakushijin K, Horne DA. Org. Lett. 2000; 2: 3185-3185
- 6o Whitlock CR, Cava MP. Tetrahedron Lett. 1994; 35: 371-371
- 6p Jiang B, Smallheer JM, Amaral-Ly C, Wuonola MA. J. Org. Chem. 1994; 59: 6823-6823
- 7a Kim A, Kim MJ, Noh TH, Hong J, Liu Y, Wei X, Jung JH. Bioorg. Med. Chem. Lett. 2016; 26: 5013-5013
- 7b Veale CG. L, Zoraghi R, Young RM, Morrison JP, Pretheeban M, Lobb KA, Reiner NE, Andersen RJ, Davies-Coleman MT. J. Nat. Prod. 2015; 78: 355-355
- 7c Pinchuk B, Johannes E, Gul S, Schlosser J, Schaechtele C, Totzke F, Peifer C. Marine Drugs 2013; 11: 3209-3209
- 8 Hequet A, Burchak ON, Jeanty M, Guinchard X, Le Pihive E, Maigre L, Bouhours P, Schneider D, Maurin M, Paris J.-M, Denis J.-N, Jolivalt C. ChemMedChem 2014; 9: 1534-1534
- 9 Bulatova NN, Suvorov NN. Chem. Heterocycl. Compd. 1969; 5: 602-602
- 10 Canoira L, Rodriguez JG, Subirats JB, Escario J.-A, Jimenez I, Martinez-Fernandez AR. Eur. J. Med. Chem. 1989; 24: 39-39
- 11 Mouhtaram M, Jung L, Stambach JF. Tetrahedron 1993; 49: 1391-1391
- 12a Imagawa K, Hata E, Yamada T, Mukaiyama T. Chem. Lett. 1996; 4: 291-291
- 12b O’Donovan DH, Rozas I. Tetrahedron Lett. 2012; 53: 4532-4532
- 13 Robiette R, Tran T.-V, Cordi A, Tinant B, Marchand-Brynaert J. Synthesis 2010; 3138-3138
- 14a Beshara CS, Hall A, Jenkins RL, Jones KL, Jones TC, Killeen NM, Taylor PH, Thomas SP, Tomkinson NC. O. Org. Lett. 2005; 7: 5729-5729
- 14b Smithen DA, Mathews CJ, Tomkinson NC. O. Org. Biomol. Chem. 2012; 10: 3756-3756
- 15a Erdik E. Tetrahedron 2004; 60: 8747-8747
- 15b Grohmann C, Wang H, Glorius F. Org. Lett. 2013; 15: 3014-3014
- 16 Marmer WN, Maerker G. J. Org. Chem. 1972; 37: 3520-3520
- 17 Wang H, Glorius F. Angew. Chem. Int. Ed. 2012; 51: 7318-7318
- 18 Murai K, Takaichi N, Takahara Y, Fukushima S, Fujioka H. Synthesis 2010; 520-520
- 19a Battini N, Padala AK, Mupparapu N, Vishwakarma RA, Ahmed QN. RSC Adv. 2014; 4: 26258-26258
- 19b Xiang J, Wang J, Wang M, Meng X, Wu A. Tetrahedron 2014; 70: 7470-7470
- 20 Gunasekera SP, McCarthy PJ, Kelly-Borges M. J. Nat. Prod. 1994; 57: 1437-1437
- 21 We did not observe the formation of imidazoline derivatives 16a,b in this reaction. It should also be noted that, in our experiments, compound 5a,b did not transform into the corresponding dihydropyrazinone derivatives 17a,b upon heating in protic or aprotic solvents in the presence of acid (AcOH, PTSA, TFA, HCl).
- 22 NMR 1H spectra of natural topsentin C and compound 17a are identical. There are differences in chemical shifts of several low intensity signals of tertiary carbon atoms in the 13C spectra. It is clear that due to the very small amount of isolated topsentin C, background signals or admixtures masked these low peaks in the spectrum of the natural compound.
- 23 Cassel S, Casenave B, Déléris G, Latxague L, Rollin P. Tetrahedron 1998; 54: 8515-8515
For total syntheses of spongotines and topsentins, see:
For total syntheses of hamacanthins and dragmacidins, see: