Keywords
classification - genotype - phenotype - von Willebrand disease - von Willebrand factor
Introduction
von Willebrand disease (VWD) is the most common (autosomally) inherited bleeding disorder
characterized by mucocutaneous bleeding, prolonged bleeding after trauma and surgery,
epistaxis, and menorrhagia.[1] It is caused by genetic defects in the von Willebrand factor (VWF) gene resulting
in either a quantitative deficiency (type 1 and 3) or dysfunction (type 2) of VWF.
The VWF gene (178kb) is located on chromosome 12 (12p13.31) and consists of 52 exons spread
over domains D1-D2-D'-D3-A1-A2-A3-D4-C1-C2-C3-C4-C5-C6-CK with different functional
properties.[2]
VWF plays an important role in primary hemostasis. During vascular injury it binds
to exposed subendothelial proteins (e.g. collagen[3]) where the adhered VWF binds to platelets through glycoprotein Ib (GPIb) alpha,[4] allowing platelet adhesion to the sites of vascular injury. VWF can also further
enhance platelet aggregation through binding of GPIIb/IIIa.[5]
VWF also acts as carrier for factor VIII (FVIII) in plasma, protecting it from rapid
proteolytic degradation and exposing it to the site of vascular damage, thus indirectly
also contributing to the plasmatic process.
This multifunctional nature of VWF contributes to the heterogeneity in clinical symptoms
and bleeding risk, but also to the diagnostic challenge of VWD.
The current International Society of Thrombosis and Haemostasis-Scientific and Standardization
Committee (ISTH-SSC) classification on VWD[6] recognizes three primary types, with type 1 as the most common variant, characterized
by a partial quantitative deficiency of a functionally normal VWF, and type 3 VWD
with a severe deficiency. Type 2 VWD is characterized by a qualitatively deficient
VWF showing decreased VWF activity/VWF antigen (VWF:Ag) or factor VIII clotting factor
activity (FVIII:C)/VWF:Ag. Different functional assays allow for further classification
of type 2 into four subtypes: 2A, 2B, 2M, and 2N (secondary levels).[6] Beyond the ISTH classification, type 2A VWD can be further divided into four subgroups
(IIA, IIC, IID, IIE, tertiary levels), based on the unique multimeric pattern that
results from mechanisms that include defective multimerization, degradation of VWF,
and increased proteolysis by ADAMTS-13.[7]
[8]
[9]
[10]
[11] Other type 2 VWDs are characterized by their high affinity for platelet GPIb (type
2B), or defective binding to platelets and/or subendothelial collagen (type 2M), or
defective binding of VWF to FVIII leading to a mild hemophilia phenotype (type 2N).[12]
A complete laboratory investigation looking at the key functions of the VWF protein
is required for a complete diagnosis and classification of VWD and to establish the
best treatment modality[13]: VWF:Ag, FVIII:C, VWF:ristocetin cofactor activity (VWF:RCo) and/or VWF:GPIb binding
activity (VWF:GPIb), VWF collagen binding capacity (VWF:CB), VWF propeptide (VWFpp),
VWF:FVIII binding capacity (VWF:FVIIIB), VWF multimeric (VWF:MM) analysis, and genetics.[2]
[8] The use of an algorithm of all available laboratory tests for the investigation
of suspected VWD can improve its diagnosis and classification.
It is known that VWF levels (meaning the laboratory phenotypes) are influenced dramatically
relative to the type of assay[14] that has been used, the percentage of coefficient of variation (%CV) of the different
assays, and intra-individual variations (physical activities, stress, inflammation,
medication, hormonal influences). Also, other factors can influence the VWF levels;
race, age, and blood group making the diagnosis of VWD, especially type 1, difficult.[12] Therefore, the clinical aspects and personal and family history of bleeding are
also required for a correct VWD diagnosis and to determine whether the inheritance
is autosomal, dominant, or recessive.
Like other landmark population studies into VWD,[15]
[16]
[17] we catalogued and classified VWD patients with all available techniques including
genetic analysis of the VWF gene to improve the understanding of the laboratory phenotype–genotype relationship
in VWD. Therefore, a cross-sectional, family-based analysis of a large cohort of patients
with suspected or known VWD was initiated previously focusing on the South Moravian
region of the Czech Republic. This was published under the title “Analysis of von Willebrand Disease in the South Moravian Population (Czech Republic):
Results from the BRNO-VWD Study”
[18] in 2019.
The main aim of the present study was to expand our existing patient cohort with additional
samples from the Czech Republic and the neighboring Slovak Republic in order to perform
laboratory phenotype–genotype analysis for complete diagnosis and classification within
VWD in a geographical region of Central Europe, which we arbitrarily named “the Heart
of Europe.” This article reports on the additional data gathered for a complete picture
that should be combined with the already published results.
Patients and Methods
Study Design
The study is an extension of our previous BRNO-VWD study,[18] which reported on 166 completely characterized VWD patients, by including additional
samples for a cross-sectional, family-based characterization of VWD in a large geographical
region; the South Moravian area of the Czech Republic (1.9 million people) and the
adjoining Slovak Republic with 5.5 million inhabitants under the arbitrary description
as the “Heart of Europe.” Patients were enrolled and blood samples collected by the
University Hospital Brno (Czech Republic) and the University Hospital in Bratislava
and F. D. Roosevelt Hospital in Banská, Bystrica (both in Slovak Republic).
The aim of the study was to perform a laboratory phenotype–genotype analysis in order
to completely diagnose and subtype VWD in each patient/family, and provide data on
VWF mutations. The local ethical review committees of all centers approved the study
protocol. Informed consent was obtained from all subjects in accordance with the Declaration
of Helsinki. The study design, including data collection, patient samples, and the
inclusion criteria of the participants (based on “historical” diagnosis of VWD), has
been described in more detail in our previous paper.[18]
Laboratory Phenotyping of VWD
Coagulation studies were undertaken as described previously.[18] The local laboratories performed platelet function assay (PFA-100), ristocetin-induced
platelet aggregation (RIPA), FVIII:C, VWF:Ag, and VWF:GPIb. The Antwerp study center
defined the laboratory phenotype using additional tests: VWF:CB, VWFpp, and VWF:FVIIIB
(if indicated). Where local test results were deemed discrepant and not in line with
the findings of other VWF parameter results, the tests were repeated by the Antwerp
study center as described before.[18]
VWF Multimeric analysis
The in-house VWF multimeric analysis was performed as previously described.[18] Additionally, the semi-automated Hydragel VW multimer assay was performed on the
HYDRASYS-2 Scan system (Sebia, Lisses, France) using the HYDRAGEL 5- or 11-VW multimer
kit (H5/11VWM, Sebia), according to the manufacturer's instructions,[19]
[20]
[21]
[22]
[23]
[24] and the use of pathological reference ranges for VWF multimer distribution.[25] The H5/11VWM was performed on all patients with VWF:GPIb/VWF:Ag and/or VWF:CB/VWF:Ag
<0.90. Normally a ratio cut-off of 0.60[17] is used to distinguish between type 2 and type 1 VWD, but when taken into account
the high %CV of these individual assays, a margin up to 0.90 was used for this performance.
Genetic Analysis
Genetic analysis was performed for the identification of candidate mutations either
by Sanger sequencing of VWF amplification products spanning exons 2–52, using oligonucleotide primers for selectivity
amplification of the VWF gene without interference from the homologous sequences in the pseudogene (spanning
exons 23–34), or by multiplex ligation-dependent probe amplification (MLPA), all as
described previously.[18] The obtained sequences were aligned using the Basic Local Alignment Search Tool
(blast.ncbi.nlm.nih.gov; National Library of Medicine, Bethesda, Maryland, United
States), and the Coffalyser software (MRC Holland, Amsterdam, The Netherlands) was
used for MLPA result analysis.
Candidate mutations were cross-referenced with the ISTH/European Association for Haemophilia
and Allied Disorders (EAHAD) VWD database on VWF mutations (https://grenada.lumc.nl/LOVD2/VWF/home.php?select_db=VWF). Not previously reported gene variations were subjected to three causation prediction
programs for protein comparison algorithms.[26]
[27]
[28]
[29]
[30]
VWD Classification
Classification of VWD was done according to the current ISTH-SSC VWD classification
standard[6] with recognition of type 1C subtype[31] and with an additional subdivision of: type 2A into 2A/IIA, IIC, IID, and IIE,[8]
[32]
[33]
[34]
[35] type 2B into typical and atypical 2B,[36]
[37]
[38] and 2M into 2M-GPIb binding defect (2M-GPIb),[33]
[39]
[40] 2M-collagen binding defect (2M-CB),[41]
[42]
[43] and 2M-unclassified (U), where the VWF mutation (restricted to specific domain) and the multimeric pattern were considered
more important for the final VWD classification ([Table 1]). The ISTH is in the process of putting forward a new nomenclature for the different
2M subtypes.
Table 1
Classification of VWD
VWD type
|
VWF:GPIb/VWF:Ag
|
VWF:CB/VWF:Ag
|
VWF multimers
|
Gene location
|
Other characteristics
|
Quantitative defect of VWF
|
1
|
Equally reduced VWF:Ag, VWF:GPIb, VWF:CB
|
Normal[a]
|
Whole gene
|
|
1C[31]
|
Equally reduced VWF:Ag, VWF:GPIb, VWF:CB
|
|
|
Increased VWFpp/VWF:Ag[31]
|
3
|
VWF:Ag and VWF:GPIb < 5.0 IU/dL
|
Absent
|
Whole gene
|
|
Qualitative defect of VWF
|
2A[17]
|
<0.60
|
<0.60
|
Multimeric loss
Aberrant triplet[32]
|
|
|
2A/IIA
|
<0.60
|
<0.60
|
Loss HMWM + IMWM
Pronounced first sub-band
|
A2
|
|
2A/IIC
|
<0.60
|
<0.60
|
Loss HMWM
Pronounced protomer
|
D2
|
|
2A/IIE
|
<0.60
|
<0.60
|
Loss HMWM
Absence of triplet
|
D3
|
|
2A/IID
|
<0.60
|
<0.60
|
Loss HMWM
Absence of triplet
Odd number of monomers
|
CK-terminal
|
|
2A-U
|
<0.60
|
<0.60
|
Loss HMWM (IMWM)
Aberrant triplet
|
Not A2, D2, D3, CK
|
|
2B
|
<0.60
|
<0.60
|
Loss HMWM
|
A1
|
Increased LD-RIPA response
|
a2B
|
>0.60
|
>0.60
|
Normal[36]
[37]
[38]
|
A1
|
Increased LD-RIPA response
|
2M-GPIb
|
<0.60
|
>0.60
|
Normal[a]
|
A1[33]
[39]
[40]
|
|
2M-CB
|
>0.60
|
<0.60
|
Normal
|
A3[41]
[42]
[43]
|
|
2M-U
|
<0.60
|
>0.60
|
Normal
|
Outside A1
|
|
2N
|
>0.60
|
>0.60
|
Normal
|
D'-D3
|
FVIII:C/VWF:Ag <0,60
|
Abbreviations: a2B, atypical type 2B VWD; Ag, antigen; CB, collagen binding; FVIII,
factor VIII; GPIb, glycoprotein Ib; HMWM, high-molecular-weight multimer; IMWM, intermediate-molecular-weight
multimer; LD-RIPA, low-dose ristocetin-induced platelet aggregation; U, unclassified;
VWFpp, von Willebrand propeptide; VWD, von Willebrand disease.
a VWD type where the current VWD classification allows some slight abnormalities.[6]
[15]
[44]
Statistical Analysis
Data analysis was performed using the IBM SPSS statistics software for Windows, version
27.0 (SPSS Inc., IBM Corporation, Armonk, New York, United States). Results are reported
in percentage (%) of the whole study cohort.
Results
Patients
A total of 227 new patients belonging to 134 families were enrolled into the study.
In total, 191/227 patients (in 117 families) were confirmed as having VWD; 36/227
subjects were excluded on the basis of uncertainty of the VWD diagnosis because of
normal VWD levels without clinical bleeding symptoms (probably not having VWD) or
borderline/low VWD levels probably due to their blood group O; in both cases an absence
of a VWF mutation was found. Of course the blood samples in the study were not those of the
historical diagnosis. Their characteristics are shown in [Table 2].
Table 2
Characteristics of the study population
Details study cohort
|
Individuals, n = 227 (%)
|
Probands
Family members
|
134 (59.0)
93 (41.0)
|
Blood group (serological)
|
O
|
50 (22.0)
|
Non-O
|
61 (26.9)
|
Unknown
|
116 (51.1)
|
Patients
|
VWD patients—proven
|
191 (84.1)
|
UP
|
36 (15.9)
|
Family members without VWD with normal levels
|
25 (11.0)
|
Borderline/low levels due to blood group O
|
11 (4.8)
|
Abbreviations: UFM, unaffected family member; VWD, von Willebrand disease.
Note: Among 227 included cases, 134 patients were the first identified cases within
a family (named probands). 191 patients were confirmed as having VWD. 36 patients
(all family members) were classified as unaffected patients (UP) based on either normal
VWD levels and no clinical bleeding symptoms or borderline/low VWD levels due to their
blood group O, and in absence of a VWF mutation. The ABO blood group was determined by serological determination.
VWD Laboratory Phenotyping
Based on the classification criteria illustrated in [Table 1], almost half of the population (88/191, 46.1%) could be classified as type 1 VWD,
with type 2A VWD as the second largest group with a prevalence of 42/191 (22%): 2A/IIA
(12%), 2A/IIE VWD (6.8%), and 2A-U (3.1%). Type 2B, 2M, and 2N VWD represented smaller
groups with 4.7, 11.5, and 3.7%, respectively ([Table 3]). Type 2N VWD was diagnosed due to either their heterozygous type 2N mutation combined
with a “null” mutation (3/7) or double heterozygosity for a type 2N mutation (1/7),
or homozygosity of a type 2N mutation (3/7). Additionally, six carriers of a type
2N mutation were identified within type 1 patients. In total, 12/23 type 3 patients
were found within type 1 VWD families. For 11/23 type 3 patients, no family members
were included in the study.
Table 3
Frequency of different VWD types
Type VWD
|
Frequency patients, n = 191 (%)
|
Type 1
|
88 (46.1)
|
Type 2A
|
42 (22)
|
Type 2A/IIA
|
23 (12.0)
|
Type 2A/IIC
|
–
|
Type 2A/IIE
|
13 (6.8)
|
Type 2A-U
|
6 (3.1)
|
Type 2B
|
9 (4.7)
|
Type 2M-GPIb
|
22 (11.5)
|
Type 2N
|
7 (3.7)
|
Homozygous 2N VWD mutation
|
3 (1.6)
|
Compound heterozygous 2N VWD mutation
|
1 (0.5)
|
Heterozygous 2N + null allele[a]
|
3 (1.6)
|
Type 3
|
23 (12.0), 12 within type 1 family
|
Abbreviations: GPIb, glycoprotein Ib; U, unclassified; VWD, von Willebrand disease.
Note: VWD patients were classified in line with the current ISTH-SSC VWD classification[6] and a supplementary sub-classification of type 2A VWD into IIA, IIC, IID, and IIE.
a All null alleles were type 1 VWD Åland mutation p.Pro812Argfs*31.
Both type 1 and type 2 had reduced VWF levels, but they could have been distinguished
by their VWF activity (VWF:GPIb and/or VWF:CB) to VWF:Ag ratios with a cut-off >0.6
denoting a type 1 and <0.6 denoting a type 2. Type 2A (except 2A/IIE) and type 2B
obtained reduced ratios for VWF:GPIb and VF:CB to VWF:Ag, in contrast to type 2M,
which revealed only a reduced ratio for VWF:GPIb. Median VWD parameter levels for
each VWD (sub-)type at time of inclusion are shown in [Table 4].
Table 4
Median VWD parameter levels for each VWD (sub-)type at the time of inclusion
VWD patients
(n = 191)
|
Median values [ref. range]
|
FVIII:C IU/dL
(95% CI)
|
VWF:Ag IU/dL
(95% CI)
|
VWF:GPIb IU/dL
(95% CI)
|
VWF:CB IU/dL
(95% CI)
|
VVWFpp IU/dL
(95% CI)
|
FVIII:C/VWF:Ag
|
VWF:GPIb/VWF:Ag
|
VWF:CB/VWF:Ag
|
VWFpp/VWF:Ag
|
[60–140]
|
[60–160]
|
[60–150]
|
[60–150]
|
[60–140]
|
[>0.60]
|
[>0.60]
|
[>0.60]
|
[<1.50]
|
Type1
(n = 88)
|
71.0
(68.1–82.6)
|
40.0
(40.8–49.1)
|
38.0
(37.6–45.8)
|
39.0
(38.1–48.0)
|
57.0
(54.3–66.6)
|
1.76
(1.65–1.97)
|
0.96
(0.89–0.98)
|
0.97
(0.90–0.99)
|
1.33
(1.26–1.71)
|
Type 2
(n = 80)
|
47.0
(44.2–56.8)
|
47.0
(41.6–53.0)
|
14.0
(16.5–26.7)
|
18.0
(30.9–31.9)
|
93.0
(87.9–112.4)
|
1.2
(1.1–1.4)
|
0.39
(0.42–0.57)
|
0.60
(0.52–0.69)
|
2.23
(2.20–2.71)
|
Type 2A
(n = 42)
|
48.0
(43.4–60.3)
|
43.0
(37.4–52.5)
|
12.0
(11.0–16.4)
|
10.0
(10.9–18.4)
|
98.0
(90.4–132.3)
|
1.16
(1.15–1.44)
|
0.28
(0.31–0.50)
|
0.33
(0.31–0.52)
|
2.44
(2.33–3.03)
|
Type 2A/IIA
(n = 23)
|
48.0
(42.2–56.1)
|
50.0
(41.3–57.6)
|
12.0
(8.5–16.2)
|
6.0
(4.6–12.6)
|
101.0
(91.4–132.2)
|
1.04
(0.94–1.15)
|
0.22
(0.19–0.35)
|
0.13
(0.11–0.29)
|
2.23
(2.05–2.51)
|
Type 2A/IIE
(n = 13)
|
39.0
(30.6–63.9)
|
24.0
(15.6–47.3)
|
16.0
(12.7–23.3)
|
18.0
(13.2–23.2)
|
79.0
(59.4–119.8)
|
1.79
(1.46–1.98)
|
0.72
(0.55–0.87)
|
0.72
(0.55–0.96)
|
3.29
(2.64–4.43)
|
Type 2A-U
(n = 6)
|
51.0
(24.5–114.1)
|
53.0
(26.2–83.8)
|
7.0
(3.7–16.6)
|
22.0
(13.9–41.8)
|
134.0
(31.7–269.1)
|
1.30
(0.76–1.88)
|
0.16
(0.00–0.57)
|
0.53
(0.47–0.57)
|
2.62
(1.32–3.48)
|
Type 2B
(n = 9)
|
49.0
(30.7–79.6)
|
47.0
(38.2–68.2)
|
14.0
(7.9–22.1)
|
18.0
(10.1–26.5)
|
121.0
(97.3–137.4)
|
0.88
(0.74–1.34)
|
0.20
(0.12–0.60)
|
0.33
(0.18–0.61)
|
2.55
(1.87–2.89)
|
Type 2M-PIb
(n = 22)
|
55.5
(42.0–68.6)
|
36.0
(30.0–55.2)
|
16.0
(14.3–31.2)
|
28.0
(27.6–52.5)
|
86.5
(65–92.7)
|
1.51
(1.29–2.01)
|
0.53
(0.44–0.69)
|
0.95
(0.85–1.03)
|
1.98
(1.88–3.03)
|
Type 2N
(n = 7)
|
20.5
(15.0–28.0)
|
62.5
(39.6–89.5)
|
72.0
(33.0–115.0)
|
68.0
(39.1–94.3)
|
73.0
(57.0–85.4)
|
0.33
(0.29–0.40)
|
1.05
(0.84–1.34)
|
1.04
(0.83–1.24)
|
1.08
(0.82–1.59)
|
Abbreviations: Ag, antigen; CB, collagen binding; CI, confidence interval; FVIII,
factor VIII; GPIb, glycoprotein Ib; pp, propeptide; n.c., not calculated; VWD, von
Willebrand disease; VWF, von Willebrand factor.
Note: Although type 1 and 2 had reduced VWF levels, they could be distinguished by
their VWF activity (VWF:GPIb and/or VWF:CB) to VWF:Ag ratios with a cut off >0.6 denoting
a type 1 and <0.6 denoting type 2. Type 2A (except 2A/IIE) and 2B obtained reduced
ratios for VWF:GPIb and VWF:CB to VWF:Ag in contrast to type 2M, which had only a
reduced ratio for VWF:GPIb/VWF:Ag.
Distinction between type 2A and 2B was done by RIPA, which was done locally, but unfortunately,
LD-RIPA was performed for only 6/9 type 2B patients, with 3/6 showing a pathognomonically
increased LD-RIPA response (0.6 mg/mL) (normal range < 20%). Despite a normal LD-RIPA,
3/6 patients were ultimately classified as type 2B based on an aberrant VWF multimer
pattern and the presence of a VWF mutation associated with the type 2B VWD pattern.
VWF Multimeric Analysis
All 191 patients underwent VWF multimeric analysis using the in-house method. For
121 patients, taking into account the 0.90 cut-off for the VWF:GPIb and/or VWF:CB
to VWF:Ag ratios, also the semi-automated Hydragel VW multimeric (H5/11VWM) method
was performed. Results of both methods, in-house and H5/11VWM, revealed a concordant
VWF multimeric pattern in line with the proposed laboratory phenotype (VWF:Ag, VWF:GPIb,
VWF:CB, VWFpp, and FVIII:C) in, respectively, 84 and 82% of all cases, and a discordant
multimeric pattern compared with the proposed laboratory phenotype in, respectively,
16 and 18% of all cases ([Fig. 1]).
Fig. 1
Results of von Willebrand factor multimers, in-house and H5/11VWM, with discordant
VWF multimeric pattern compared with the proposed laboratory phenotype results. Note: Patients 1 and 2 had a laboratory phenotype consistent with type 1. Patients
1 had a loss of HMWM with both methods. Patient 2 revealed a loss of HMWM using the
H5/11VWM. Normal multimers were observed using the in-house method. Both patients
were ultimately classified as type 2 VWD; patient 1 as 2B and patient 2 as 2M VWD
based on the aberrant multimeric patterns and the presence of a corresponding VWF
mutation. Ag, antigen; CB, collagen binding; FVIII, factor VIII; GPIb, glycoprotein
Ib; HMWM, high-molecular-weight multimer; IMWM, intermediate-molecular-weight multimer;
LMWM, low-molecular-weight multimer; MM, multimers; NPP, normal plasma pool; VWD,
von Willebrand disease; VWF, von Willebrand factor; VWFpp, von Willebrand factor propeptide.
A loss of high-molecular-weight multimer (HMWM) in type 1 laboratory phenotype cases
was observed in 12% when measured with the in-house method and in 19% with the H5/11VWM.
These patients were ultimately classified as type 2 VWD (type 2A/IIE, 2B, and 2M)
based on the aberrant multimeric patterns and the presence of a corresponding VWF mutation.
Conversely, a normal multimeric pattern with a type 2 laboratory phenotype was observed
by the in-house method and H5/11VWM in respectively 28 and 17% of all cases. Overall,
the laboratory phenotype of type 2 with normal multimeric patterns was mainly seen
in type 2M-GPIb patients. These patients historically are not expected to have multimeric
losses, although the current VWD classification allows some slight abnormalities.[6]
[15]
[44] Remarkably, the H5/11VWM observed approximately 50% more HMWM losses in type 2M-GPIb
patients than the in-house method, a phenomenon well described in our publication
on the Hydragel VW multimer assay.[25]
Genetic Analysis
DNA sequencing identified at least one causal mutation in 161/191 cases (84%), while
for 30/191 (22/88 type 1 and 8/23 type 3) no genetic confirmation for the diagnosis
of VWD was obtained. A compound heterozygous variation could be found in 27/161 patients.
In comparison with the previously reported BRNO-VWD study results,[18] another 45 different candidate mutations (34 missense mutations and 11 truncating
variations) were identified ([Fig. 2]). Twenty-three of them (16 missense and 7 truncating) were not previously reported
gene variations (in 32 patients), and were observed in VWD type 1 (n = 19); type 2M-GPIb (n = 6), type 3 (n = 4), type 2A/IIE (n = 2); and type 2A/IIA (n = 1). The results of the “new” missense mutations after subjection to three causation
prediction programs for protein comparison algorithms[26]
[27]
[28]
[29]
[30] are reported in [Table 5]. In total, 8/16 “new” variants were considered “deleterious” by all three programs,
and 5/16 as “benign.” The prediction programs gave conflicting results for three variants,
which makes these results difficult to interpret, but since they were not found in
conjunction with another “causal” mutation, the probability that they do cause a VWF
defect is high.
Table 5
Missense mutations which are not previously reported in the ISTH/EAHAD database on
VWF mutation and subjected to causation prediction programs for protein comparison algorithms
domain
|
HGVSp
|
HGVSc
|
Frequency
|
Type VWD
|
DEOGEN2
comparison
|
Poly-Phen2
comparison
|
Mutationtaster comparison
|
gnomAD
MAF%
|
D1
|
p.Gln218His
|
c.654G > T
|
1
|
1
|
Benign
|
Benign
|
Polymorphism
|
UNK
|
D3
|
p.Cys1165Trp
|
c.3495C > G
|
1
|
1
|
Deleterious
|
Probably damaging
|
Disease causing
|
UNK
|
p.Cys1190Phe
|
c.3569G > T
|
1
|
2A/IIE
|
Deleterious
|
Probably damaging
|
Disease causing
|
UNK
|
p.Cys1196Tyr
|
c.3585G > A
|
1
|
2A/IIE
|
Deleterious
|
Probably damaging
|
Disease causing
|
UNK
|
A1
|
p.Arg1334Trp
|
c.4000C > T
|
2
|
2M-GPIb
|
Deleterious
|
Probably damaging
|
Disease causing
|
NFE: 0.0055
|
p.Val1414Glu
|
c.2441T > A
|
2
|
2M-GPIb
|
Deleterious
|
Probably damaging
|
Disease causing
|
UNK
|
p.Ile1416Thr
|
c.4247T > C
|
2
|
2M-GPIb
|
Benign
|
Probably damaging
|
Disease causing
|
NFE: 0.0009
|
A2
|
p.Met1521Lys
|
c.4562T > A
|
1
|
2A/IIA
|
Benign
|
Benign
|
Disease causing
|
UNK
|
A3
|
p.Gly1775Asp
|
c.5324G > A
|
1
|
1[a]
|
Benign
|
Benign
|
Polymorphism
|
UNK
|
p.Gly1826Arg
|
c.5476G > A
|
2
|
1
|
Deleterious
|
Probably damaging
|
Disease causing
|
UNK
|
D4
|
p.Cys2085Tyr
|
c.6254G > A
|
2
|
1
|
Deleterious
|
Probably damaging
|
Disease causing
|
UNK
|
p.Cys2248Tyr
|
c.6737G > A
|
1
|
1
|
Deleterious
|
Probably damaging
|
Disease causing
|
UNK
|
p.Arg2342Cys
|
c.7024C > T
|
1
|
1
|
Benign
|
Benign
|
Polymorphism
|
NFE: 0.0018
|
C4
|
p.Ala2569Ser
|
c.7706G > T
|
1
|
1[a]
|
Benign
|
Benign
|
Polymorphism
|
UNK
|
C6
|
p.Arg2663Pro
|
c.7988G > C
|
1
|
1
|
Benign
|
Benign
|
Polymorphism
|
ALL: 0.1429
|
p.Glu2698Gly
|
c.8093A > G
|
1
|
1
|
Deleterious
|
Benign
|
Polymorphism
|
UNK
|
Abbreviations: ALL, all-round population; EAHAD, European Association for Haemophilia
and Allied Disorders; ISTH, International Society of Thrombosis and Haemostasis; MAF,
minor allele frequency; NFE, not finished European population; UNK, variant not found
in other populations; VWD, von Willebrand disease.
Note: In bold, novel mutation with disagreement in prediction score. The gnomAD MAF
frequency (%) indicates whether a variant has been found in a healthy population with
a significant MAF score. In total, 8/16 variations were predicted to be deleterious,
5/16 as benign, and 3/16 were doubtful.
a Compound heterozygous with another mutation.
For all 191 VWD patients, the MLPA was performed revealing a large deletion in 22/191
patients ([Fig. 3]); 15/22 in type 3 and 7/22 in type 1. A heterozygous deletion of exons 1–3 (n = 10), exon 10 (n = 2), exon 49 (n = 1), and exons 1–52 (n = 1), and a homozygous deletion of exons 1–3 (n = 8) were found.
Fig. 3
VWF gene variation identified using DNA sequencing and multiplex ligation-dependent
probe amplification (MLPA).
A total of seven patients with a heterozygous deletion (exons 1–3 [n = 4], exon 10 [n = 2], or exon 49 [n = 1]) were compounded by a gene variation already identified by DNA sequencing, resulting
in type 3 VWD.
For 15 patients with a large deletion (homozygous exons 1–3 [n = 8], heterozygous exons 1–3 [n = 6], and heterozygous exons 1–52 [n = 1]), no “extra” mutation was found by direct DNA sequencing, which increased the
linkage from approximately 84% up to approximately 92% over all types.
Laboratory Phenotype/Genotype correlation
The proposed laboratory phenotypes (based on VWF:Ag, VWF:GPIb, VWF:CB, VWFpp, and
FVIII:C) were correlated with the multimeric and genetic analysis results ([Supplementary Table S1]). In total, 89% of the identified gene variations confirmed the proposed laboratory
phenotypic and multimeric results. Eight amino acid substitutions (in 36 patients)
were observed in different laboratory phenotypes ([Table 6]).
Table 6
Amino acid substitutions occurring in different von Willebrand disease phenotypes
HGVSp
|
ISTH/EAHAD class
|
Laboratory phenotype
|
Frequency
|
Final VWD classification
|
Remarks
|
D1 domain
|
p.Pro293Glnfs*164
|
–
|
2M
|
1/1
|
1
|
Final classification based on NHMWM and D1 domain mutation
|
D3 domain
|
p.Trp1144Gly
|
1 >> 2A
|
1
|
6/8
|
2A/IIE
|
Final classification based on LHMWM and D3 domain mutation
|
2A
|
1/8
|
2A/IIE
|
–
|
3
|
1/8
|
3
|
Compound heterozygous with large gene deletion
|
p.Tyr1146Cys
|
1 >> 2A
|
1
|
1/2
|
2A/IIE
|
Final classification based on NHMWM and D3 domain mutation (within 1 family)
|
2A
|
1/2
|
2A/IIE
|
p.Cys1196Tyr
|
–
|
1
|
1/1
|
2A/IIE
|
Final classification based on LHMWM and D3 domain mutation
|
A1 domain
|
p.Arg1315Cys
|
1 (2A), 2M, U
|
1
|
5/9
|
2M-GPIb
|
Final classification based on A1 domain mutation, NHMWM with in-house and LHMWM with
H5/11HVWM
|
2M-GPIb
|
4/9
|
2M-GPIb
|
p.Arg1334Trp
|
–
|
1
|
1/2
|
2M-GPIb
|
Final classification based on NHMWM and A1 domain mutation (within 1 family)
|
2M-GPIb
|
1/2
|
2M-GPIb
|
p.Val1414Glu
|
–
|
1
|
1/2
|
2M-GPIb
|
Final classification based on A1 domain mutation, NHMWM with in-house and LHMWM with
H5/11HVWM (within 1 family)
|
2M-GPIb
|
1/2
|
2M-GPIb
|
A2 domain
|
p.Gly1579Arg
|
2A
|
1
|
1/11
|
2A/IIA
|
Patient with normal multimer pattern. Final classification solely based on A2 domain
mutation
|
2A/IIA
|
10/11
|
2A/IIA
|
–
|
Abbreviations: LHMWM, loss of high-molecular-weight multimers; NHMWM, normal high-molecular-weight
mulitmers; H5/11VWM, Hydragel VW multimeric method.
Notes: In bold, mutation not previously described in the ISTH/EAHAD database.
The already reported variations in D3, p.Trp1144Gly/c.3430T > C and p.Tyr1146Cys/c.3437A > G,
were found in patients with phenotypic laboratory results consistent with differing
types of VWD: p.Trp1144Gly/c.3430T > C in type 1 (6/8), type 3 (1/8), and type 2A/IIE
(1/8) VWD; p.Tyr1146Cys/c.3437A > G in type 1 (1/2) and 2A/IIE (1/2). In addition,
9/10 patients were ultimately classified as type 2A/IIE based on their corresponding
VWF type 2A/IIE multimer pattern and the location of the mutation in the D3 domain
of the VWF gene. One patient was classified as type 3 VWD because he was found to
be compound heterozygous for p.Trp1144Gly/c.3430T > C and truncating variation.
Nine patients carried the p.Arg1315Cys/c.3943C > T mutation and were finally classified
as type 2M-GPIb based on their normal VWF multimeric pattern (in-house method) and
the A1 domain mutation. For 4/9 patients this was in line with their laboratory phenotype,
but for 5/9 patients a type 1 laboratory phenotype was observed.
Although the p.Gly1579Arg/c.4735G > A mutation is generally found in type 2A/IIA patients,
a type 1 laboratory phenotype was observed in one patient. This patient showed a normal
multimeric pattern but was finally classified as type 2A/IIA solely based on his A2
domain mutation.
Four novel substitutions were found in laboratory phenotype type 1 and type 2M-GPIb
VWD: one patient with p.Pro293Glnfs*164/c.878delC had a type 2M phenotype but was
ultimately classified as type 1 VWD due the mutation located in D1, rather than in
A1. Although one patient with p.Cys1196Tyr/c.3585G > A had a type 1 phenotype, he
was classified as type 2A/IIE based on an aberrant multimeric pattern consistent with
type 2A/IIE in conjunction with a mutation in D3.
Mutations p.Arg1334Trp/c.4000C > T and p.Val1414Glu/c.2441T > A were found in patients
with a laboratory phenotype consistent with type 1 and type 2M, respectively. Based
on their aberrant multimeric pattern and the location of the mutation within the A1-domain,
they were finally classified as 2M-GPIb.
For one patient, a homozygous exon 1–3 deletion was observed, which had a laboratory
phenotype mimicking a type 1 VWD with the presence of VWF multimers, but where a relative
loss of HMWM was seen. Based on these findings, this patient was classified as a severe
type 1 VWD.
Discussion
In 2018, we published the results of our cross-sectional, family-based, VWD study,
under the title “Analysis of von Willebrand Disease in the South Moravian Population (Czech Republic):
Results from the BRNO-VWD study.”
[18] Now, we report on the results of additional samples from the Czech and Slovak Republics
in an extension of our previous study. The study was focused on improving the knowledge
of VWD laboratory phenotype–genotype relationship in a particular geographical region,
termed “the Heart of Europe.” This entailed a complete laboratory investigation of
a cohort of 227 VWD patients, included based on “historical” results, with the study
work done on new purposely collected blood samples. The study was carried out by the
University Hospital Brno (Czech Republic), University Hospital in Bratislava, and
F. D. Roosevelt Hospital in Banská, Bystrica (both in Slovak Republic), and the Antwerp
University Hospital (Belgium).
Our study catalogued and classified VWD patients with all available techniques. According
to the current ISTH-SSC classification,[6] patients were classified into type 1, 2A, 2B, 2M, 2N, or 3, with a subdivision of
type 2A into 2A/IIA, IIC, IID, and IIE,[8]
[32]
[33]
[34]
[35] type 2B into typical and atypical 2B,[36]
[37]
[38] and 2M into 2M-GPIb,[33]
[39]
[40] 2M-CB,[41]
[42]
[43] and U.
A total of 191 patients were confirmed as having VWD and around half of them could
be classified as type 1 VWD, type 2A (2A/IIA and 2A/IIE) as the second largest group,
and with type 2B (typical), 2M-GPIb, and 2N as less frequent types. This distribution
has been reported before[15]
[16]
[17]
[45] and is in line with our own previous reported findings.[18] In addition, 50% of type 3 patients were found within type 1 VWD families. For the
other 50%, no family history or results were available.
Concordant results between the VWF multimer pattern, restricted to the current ISTH-SSC
classification,[6] and the observed laboratory phenotype (FVIII:C, VWF:Ag, VWF:GPIb, VWF:CB, and VWFpp)
were found in approximately 83% of the entire study population. Around 17% of all
cases showed a multimeric pattern discrepant with the laboratory phenotype, but the
ultimate classification was validated by the corresponding VWF mutations.
Although genetic analysis is not used in routine practice to diagnose VWD, it was,
in conjunction with the ISTH/EAHAD database on VWF mutations, used as a final arbiter to classify VWD. Although the database contains
most known VWF mutations, the VWD classification depends on the laboratory panel and sometimes the
same mutation is ascribed to multiple VWD types. As a consequence, there is no gold
standard in VWD classification.
Using DNA sequencing, at least one underlying causative mutation was found in 84%
of all patients. We were able to identify another 45 candidate mutations which were
not previously observed in the initial BRNO-VWD cohort.[15] The Åland mutation (p.Pro812Argfs*31, type1) continues to be the most frequent mutation
(15%) in all VWD cases, which has also been reported in other European countries.[15]
[16]
[17]
Twenty-three novel VWF gene variations were identified with 19 confirming the laboratory phenotype and multimeric
pattern. MLPA identified large deletions of exon 1–3[46] in 15 VWD patients (7 type 3 and 8 type 1), where no underlying mutation had been
found by direct DNA sequencing, accounting for a linkage of 92% of all VWD patients,
overall, and 83% of all type 1 patients, a figure which has also been reported in
other population studies.[15]
[17]
[47]
[48]
[49]
[50] But it has to be noted that the rate of genetic variants observed in VWD type 1
patients can be attributed to their inclusion criteria. Subjects with VWF levels <30 IU/dL
are more likely to have a VWF variant than those with levels ranging between 30 and
50 IU/dL. Still, there will be a number of VWD patients, especially type 1, who do
not have an associated VWF mutation.
It is already known that a number of loci outside the VWF gene have been shown to affect the VWF levels.[51]
[52] Therefore, patients without an identified causal mutation could go forward for investigation
of other genes outside the VWF locus which implicate in alternating VWF levels.
In general, all results observed for the samples included by the Slovak Republic were
very similar to those included by the Czech Republic, unsurprisingly given that both
Republics are neighboring states and they formed parts of Czechoslovakia until 1993,
and historically find their ancestry in Great Moravia. Therefore, all included samples
by both Republics can be considered as a single population cohort in future study
projects or comparisons with other regions.
This cross-sectional VWD study termed the “Heart of Europe” demonstrates that the
use of a basic VWF assay panel (FVIII:C, VWF:Ag, VWF:GPIb, VWF:CB, and VWFpp) is not
enough for an accurate VWD classification, since it is dramatically influenced by
several (pre-)analytical and inter-individual variations.[12]
[14] It shows that an extensive panel of all VWD assays with all available techniques,
including VWF multimer analysis and a full genetic analysis (DNA sequencing and MLPA),
is required for a complete VWD diagnosis and classification, as it was done in other
VWD population studies.[15]
[16]
[17] It provides unique information on the laboratory phenotype–genotype relationship
in VWD, including the pitfalls in diagnosis of the disease, but adds the data of a
large geographical region into the ISTH/EAHAD database on VWF mutations. This study and several other population studies[15]
[16]
[17] in VWD invite comparisons between the different mutations identified in different
regions. They could be used to follow population migration patterns which can be valuable
materials for future studies into VWD.
What Is Known about This Topic?
-
The diagnosis and classification of von Willebrand is not standardized.
-
The laboratory phenotype is highly heterogeneous due to assay variations and intra-individual
variations, which makes the diagnosis of von Willebrand disease difficult.
What Does This Paper Add?
-
We provide unique information on a large VWD cohort in central Europe in order to
understand the phenotype–genotype relationship in VWD.
-
The study illustrates current problems in VWD classification/subtyping.
Fig. 2
Location of sequence variation identified in this von Willebrand disease cohort which
was not observed in the initial BRNO-VWD cohort (
n
= 45). Missense mutations are present on top (n = 34), and truncating variations (n = 11) are illustrated at the bottom. Novel gene variations (n = 23) are marked with $.