Synlett 2017; 28(03): 306-315
DOI: 10.1055/s-0036-1588654
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© Georg Thieme Verlag Stuttgart · New York

Design of Experiments: A Rational Approach Toward Non-­Covalent Asymmetric Organocatalysis

P. Renzi*
,
M. Bella*
Further Information

Publication History

Received: 06 September 2016

Accepted after revision: 27 October 2016

Publication Date:
08 December 2016 (online)


Abstract

This account describes, from a personal point of view, the possible strategies to tackle and optimize non-covalent organocatalyzed reactions. When chemical intermediates are covalently bound, predictive mechanistic scenarios can be depicted. In contrast, there are several organocatalyzed transformations (e.g., those employing cinchona alkaloids) for which optimization is essentially based on a trial-and-error approach. The experience of the authors is that these reactions can be tackled with a rational approach employing Design of Experiments (DoE). This tool is widely exploited in industrial process chemistry, but is little known within academia. The purpose of this account is to show the effectiveness and utility of DoE in asymmetric non-covalently organocatalyzed reactions, discussing selected examples.

1 Introduction: Covalently and Non-Covalently Asymmetric Organocatalyzed Reactions

2 The Challenge: Optimizing (in a Rational Way) Non-Covalently Organocatalyzed Reactions without Deep Knowledge of the Mechanism. Case Study 1

3 The Solution: DoE Might be the Best Possible Tool to Approach these Issues

4 The Application of DoE to Kinetic Resolution. Case Study 2

5 Conclusions and Outlook

 
  • References

  • 1 Current address: Institut für Organische Chemie, Universität Regensburg, Universitätsstraße 31, 93040 Regensburg, Germany.
  • 3 Franzén J, Marigo M, Fielenbach D, Wabnitz TC, Kjærsgaard A, Jørgensen KA. J. Am. Chem. Soc. 2005; 127: 18296
    • 4a Schmid MB, Zeitler K, Gschwind RM. Angew. Chem. Int. Ed. 2010; 49: 4997
    • 4b Schmid MB, Zeitler K, Gschwind RM. Chem. Eur. J. 2012; 18: 3362
  • 5 In a black hole, the event horizon indicates a boundary beyond which events cannot affect an outside observer. Not even light can go out because it would require a hypothetical speed greater than that of light. No observational data can currently be obtained from the inside of a black hole. In analogy, no evidence can be gained at the moment to support the mechanism of some specific asymmetric reactions.
  • 6 Silvi M, Renzi P, Rosato D, Margarita C, Vecchioni A, Bordacchini I, Morra D, Nicolosi A, Cari R, Sciubba F, Scarpino Schietroma DM, Bella M. Chem. Eur. J. 2013; 19: 9973
  • 7 Breugst M, Tokuyasu T, Mayr H. J. Org. Chem. 2010; 75: 5250
  • 8 For a review on cyclic β-ketoesters, see: Schotes C, Mezzetti A. ACS Catal. 2012; 2: 528
    • 9a Jiang H, Nielsen JB, Nielsen M, Jørgensen KA. Chem. Eur. J. 2007; 13: 9068
    • 9b Vesely J, Ibrahem I, Rios R, Zhao G.-L, Xu Y, Córdova A. Tetrahedron Lett. 2007; 48: 2193
    • 9c Ma S, Wu L, Liu M, Huang Y, Wang Y. Tetrahedron 2013; 69: 2613

      For pioneering work on cinchona-alkaloid-derived thiourea catalysts, see:
    • 10a Vakulya B, Varga S, Csámpai A, Sóos T. Org. Lett. 2005; 7: 1967
    • 10b McCooey SH, Connon SJ. Angew. Chem. Int. Ed. 2005; 44: 6367
    • 10c Li B.-J, Jiang L, Liu M, Chen Y.-C, Ding L.-S, Wu Y. Synlett 2005; 603
    • 10d Ye J, Dixon DJ, Hynes PS. Chem. Commun. 2005; 4481
  • 11 For a combination of cinchona-alkaloid-derived thioureas and acids, see for example: Chen X, Zhu W, Qian W, Feng E, Zhou Y, Wang J, Jiang H, Yao Z.-J, Liu H. Adv. Synth. Catal. 2012; 354: 2151
  • 12 Sigman MS. Angew. Chem. Int. Ed. 2007; 46: 4748
  • 13 The Fourth European Workshop in Drug Synthesis (IV EWDSy), University of Siena Certosa di Pontignano, Siena, Italy, May 27th–31st, 2012.

    • For books and reviews on DoE, see:
    • 14a Carlson R, Carlson JE. Design and Optimization in Organic Synthesis . 2nd ed. Elsevier; Amsterdam: 2005
    • 14b Antony J. Design of Experiments for Engineers and Scientists . Elsevier; Amsterdam: 2003
    • 14c Box GE. P, Draper NR. Empirical Model-Building and Response Surfaces . John Wiley & Sons; New York: 1986
    • 14d Murray PM, Tyler SN. G, Moseley JD. Org. Process Res. Dev. 2013; 17: 40
    • 14e Leardi R. Anal. Chim. Acta 2009; 652: 161
    • 14f Tye H. Drug Discovery Today 2004; 9: 485
  • 15 Murray PM, Bellany F, Benhamou L, Bucar D.-K, Tabor AB, Sheppard T. Org. Biomol. Chem. 2016; 14: 2373
  • 16 In order to estimate the reproducibility, the best results found (Table 1, entry 2) were replicated. Compound 4a was originally obtained in an isolated yield of 46%, with 95% ee. Replicated run 1, 4a: 51% yield, 95% ee. Replicated run 2, 4a: 56% yield, 94% ee.
    • 17a Ideta R, Nakazawa Y, Iwaki H, Ishino A, Tajima M. EP1806121(A1), 2007
    • 17b Larsen SD, Connell MA, Cudahy MM, Evans BR, May PD, Meglasson MD, Sullivan TJ. O, Schostarez HJ, Sih JC, Stevens FC, Tanis SP, Tegley CM, Tucker JA, Vaillancourt VA, Vidmar TJ, Watt W, Yu JH. J. Med. Chem. 2001; 44: 1217
    • 17c Mittendorf J, Kunisch F, Matzke M, Militzer H.-C, Schmidt A, Schönfeld W. Bioorg. Med. Chem. Lett. 2003; 13: 433
  • 18 Renzi P, Kronig C, Carlone A, Eröksüz S, Berkessel A, Bella M. Chem. Eur. J. 2014; 20: 11768
    • 19a Berkessel A, Cleemann F, Mukherjee S, Müller TN, Lex J. Angew. Chem. Int. Ed. 2005; 44: 807
    • 19b Berkessel A, Mukherjee S, Cleemann F, Müller TN, Lex J. Chem. Commun. 2005; 1898
    • 19c Berkessel A, Mukherjee S, Müller TN, Cleemann F, Roland K, Brandenburg M, Neudörfl J.-M, Lex J. Org. Biomol. Chem. 2006; 4: 4319
    • 19d Lee JW, Ryu TH, Oh JS, Bae HJ, Janga HB, Song CE. Chem. Commun. 2009; 7224
    • 19e Berkessel A, Cleemann F, Mukherjee S. Angew. Chem. Int. Ed. 2005; 44: 7466
  • 20 JMP 11® is a statistical software package available from SAS.
  • 21 DSD is a three-level designs for screening quantitative factors in the presence of active first- and second-order effects. It is an efficient screening design which allows evaluation of continuous parameters at three levels (the extreme values of the range under study plus a central point), also allowing the evaluation of curvature and generating non-linear models, whilst keeping the number of experiments low compared with optimization designs.
  • 22 Kagan HB, Fiaud JC. Kinetic Resolution . In Topics in Stereochemistry . Vol. 18. Eliel EL, Wilen SH. John Wiley & Sons; New York: 1988: 249