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DOI: 10.1055/s-0036-1588768
Chemoenzymatic Synthesis of Ubiquitous Biological Redox Cofactors
Publication History
Received: 12 December 2016
Accepted after revision: 08 March 2017
Publication Date:
10 April 2017 (online)
◊ These authors contributed equally to this work.
Abstract
Redox cofactors are utilized by a myriad of proteins, ranging from metabolic enzymes to those performing post-translational modifications. Labeled redox cofactors have served as a vital tool for a broad range of studies. This account describes chemoenzymatic syntheses of the isotopically labeled, biologically important redox cofactors: nicotinamide adenine dinucleotide, methylene tetrahydrofolate, and flavin nucleotides. An overview of the general strategy is presented. These examples demonstrate the utility of enzymatic synthesis.
1 Introduction
2 Nicotinamide Cofactors
2.1 Synthesis of Remote-Labeled 14C-NADPH
2.1.1 Synthesis of [Ad-14C]NADPH
2.1.2 Synthesis of [Carbonyl-14C]NADPH
2.2 Synthesis of S- and R-[4-3H]NADPH
2.2.1 One-Step S- and Three-Step R-[4-3H]NADPH Synthesis
2.2.2 One-Pot, One-Step R-[4-3H]NADPH Synthesis
2.3 Synthesis of S- and R-[Ad-14C, 4-2H]NADPH
2.3.1 One-Step S-, Three-Step R-[Ad-14C, 4-2H]NADPH Synthesis
2.3.2 One-Pot, One-Step R-[Ad-14C, 4-2H]NADPH Synthesis
3 Methylene Tetrahydrofolate
4 Flavin Nucleotides
5 Conclusions and Outlook
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References
- 1a Wang Z. Kohen A. J. Am. Chem. Soc. 2010; 132: 9820
- 1b Wang Z. Abeysinghe T. Finer-Moore JS. Stroud RM. Kohen A. J. Am. Chem. Soc. 2012; 134: 17722
- 1c Stojković V. Perissinotti LL. Willmer D. Benkovic SJ. Kohen A. J. Am. Chem. Soc. 2012; 134: 1738
- 1d Singh P. Sen A. Francis K. Kohen A. J. Am. Chem. Soc. 2014; 136: 2575
- 1e Guo Q. Gakhar L. Wickersham K. Francis K. Vardi-Kilshtain A. Major DT. Cheatum CM. Kohen A. Biochemistry 2016; 55: 2760
- 2 Voet D. Voet GJ. Fundamentals of Biochemistry . Wiley; New York: 1999
- 3a Cook PF. Oppenheimer NJ. Cleland WW. Biochemistry 1981; 20: 1817
- 3b Hixson SS. Hixson SH. Photochem. Photobiol. 1973; 18: 135
- 3c Singh P. Islam Z. Kohen A. Examinations of the Chemical Step in Enzyme Catalysis . In Methods in Enzymology . Vol. 577. Voth GA. Chap. 11 Academic Press; Cambridge: 2016: 287-318
- 3d Stone SR. Mark A. Morrison JF. Biochemistry 1984; 23: 4340
- 3e Singh P. Morris H. Tivanski AV. Kohen A. Anal. Biochem. 2015; 484: 169
- 3f Singh P. Morris H. Tivanski AV. Kohen A. Data Brief 2015; 4: 19
- 4a Liu CT. Francis K. Layfield JP. Huang X. Hammes-Schiffer S. Kohen A. Benkovic SJ. Proc. Natl. Acad. Sci. U.S.A. 2014; 111: 18231
- 4b Singh P. Abeysinghe T. Kohen A. Molecules 2015; 20: 1192
- 4c Wang L. Goodey NM. Benkovic SJ. Kohen A. Proc. Natl. Acad. Sci. U.S.A. 2006; 103: 15753
- 4d Swanwick RS. Maglia G. Tey L.-h. Allemann RK. Biochem. J. 2006; 394: 259
- 4e Ruiz-Pernia JJ. Luk LY. P. García-Meseguer R. Martí S. Loveridge EJ. Tuñón I. Moliner V. Allemann RK. J. Am. Chem. Soc. 2013; 135: 18689
- 4f Wang Z. Singh P. Czekster CM. Kohen A. Schramm VL. J. Am. Chem. Soc. 2014; 136: 8333
- 4g Singh P. Francis K. Kohen A. ACS Catal. 2015; 5: 3067
- 5 Sen A. Stojković V. Kohen A. Anal. Biochem. 2012; 430: 123
- 6a Colowick SP. Kaplan NO. Preparation and Analysis of Labeled Coenzymes, In Methods in Enzymology . Vol. 4. Academic Press; Cambridge: 1957: 840-855
- 6b Markham KA. Sikorski RS. Kohen A. Anal. Biochem. 2004; 325: 62
- 6c Nishizuka Y. Ueda K. Nakazawa K. Hayaishi O. J. Biol. Chem. 1967; 242: 3164
- 6d Ueda K. Yamamura H. Preparation of Various Labeled NAD’s. In Methods in Enzymology . Academic Press; Cambridge: 1971. Part B, Vol. 18 60-67
- 7 Markham KA. Sikorski RS. Kohen A. Anal. Biochem. 2004; 322: 26
- 8 Kelli A. Markham KA. Amnon K. Curr. Anal. Chem. 2006; 2: 379
- 9 McCracken JA. Wang L. Kohen A. Anal. Biochem. 2003; 324: 131
- 10 Agrawal N. Kohen A. Anal. Biochem. 2003; 322: 179
- 11 Yahashiri A. Sen A. Kohen A. J. Labelled Compd. Radiopharm. 2009; 52: 463
- 12a Francis K. Sapienza PJ. Lee AL. Kohen A. Biochemistry 2016; 55: 1100
- 12b Sikorski RS. Wang L. Markham KA. Rajagopalan PT. Benkovic SJ. Kohen A. J. Am. Chem. Soc. 2004; 126: 4778
- 13a Wang Z. Sapienza PJ. Abeysinghe T. Luzum C. Lee AL. Finer-Moore JS. Stroud RM. Kohen A. J. Am. Chem. Soc. 2013; 135: 7583
- 13b Islam Z. Strutzenberg TS. Gurevic I. Kohen A. J. Am. Chem. Soc. 2014; 136: 9850
- 13c Islam Z. Strutzenberg TS. Ghosh AK. Kohen A. ACS Catal. 2015; 5: 6061
- 13d Agrawal N. Mihai C. Kohen A. Anal. Biochem. 2004; 328: 44
- 13e Hong B. Kohen A. J. Labelled Compd. Radiopharm. 2005; 48: 759
- 13f Agrawal N. Hong B. Mihai C. Kohen A. Biochemistry 2004; 43: 1998
- 13g Hong B. Haddad M. Maley F. Jensen JH. Kohen A. J. Am. Chem. Soc. 2006; 128: 5636
- 14a Agrawal N. Lesley SA. Kuhn P. Kohen A. Biochemistry 2004; 43: 10295
- 14b Koehn EM. Kohen A. Arch. Biochem. Biophys. 2010; 493: 96
- 14c Mishanina TV. Koehn EM. Conrad JA. Palfey BA. Lesley SA. Kohen A. J. Am. Chem. Soc. 2012; 134: 4442
- 14d Mishanina TV. Yu L. Karunaratne K. Mondal D. Corcoran JM. Choi MA. Kohen A. Science 2016; 351: 507
- 14e Choi M. Karunaratne K. Kohen A. Molecules 2016; 21: 654
- 15a Saeed M. Sheff D. Kohen A. J. Biol. Chem. 2011; 286: 33872
- 15b Saeed M. Tewson TJ. Erdahl CE. Kohen A. Nucl. Med. Biol. 2012; 39: 697
- 15c Nilaweera TD. Saeed M. Kohen A. Biochemistry 2015; 54: 1287
- 16 Teufel R. Miyanaga A. Michaudel Q. Stull F. Louie G. Noel JP. Baran PS. Palfey B. Moore BS. Nature 2013; 503: 552
- 17 Mishanina TV. Kohen A. J. Labelled Compd. Radiopharm. 2015; 58: 370
- 18 Nielsen P. Rauschenbach P. Bacher A. Preparation, Properties, and Separation by High-Performance Liquid Chromatography of Riboflavin Phosphates. In Methods in Enzymology. Vol. 122. Academic Press; Cambridge: 1986: 209-220