Synthesis 2011(20): 3247-3254  
DOI: 10.1055/s-0030-1260216
PAPER
© Georg Thieme Verlag Stuttgart ˙ New York

Hydantoin-Free Synthesis of Peptide Ester Isocyanates, Isothiocyanates, and Dipeptidyl Ureas: The Application of Zinc Dust in a Carbonylation Procedure without Base

N. Narendra, T. M. Vishwanatha, Vommina V. Sureshbabu*
Peptide Research Laboratory, Department of Studies in Chemistry, Central College Campus, Dr. B. R. Ambedkar Veedhi, Bangalore University, Bangalore 560001, India
e-Mail: sureshbabuvommina@rediffmail.com; e-Mail: hariccb@gmail.com;
Further Information

Publication History

Received 29 April 2011
Publication Date:
07 September 2011 (online)

Abstract

Non-Schotten-Baumann conditions are described for the hydantoin-free synthesis of peptide ester isocyanates using activated zinc dust as a non-basic HCl scavenger. Also, the procedure gives no N-acylated products in the case of the conversion of amino acid and peptide amides into isocyanates.

    References

  • 1a Nowick JS. Powell NA. Nguyen TM. Noronha G. J. Org. Chem.  1992,  57:  7364 ; and references cited therein
  • 1b Nowick JS. Holmes DL. Mackin G. Noronha G. Shaka AJ. Smith EM. J. Am. Chem. Soc.  1996,  118:  2764 
  • Goldschmidt and Wick, who first attempted to synthesize these compounds by using gaseous phosgene at a temperature of 110 ˚C, found that the formed isocyanate cyclized to hydantoin:
  • 2a Goldschmidt S. Wick M. Justus Liebigs Ann. Chem.  1952,  575:  217 
  • 2b Goldschmidt S. Wick M. Z. Naturforsch., B: Chem. Sci.  1950,  5:  170 
  • 3 Nowick JS. Holems DL. Noronha G. Smith EM. Nguyen TM. Huang S.-L. J. Org. Chem.  1996,  61:  3929 
  • 4 Chong PY. Petillo PA. Tetrahedron Lett.  1999,  40:  4501 ; the base-catalyzed cyclization has constituted a main synthetic route for making peptide hydantoins
  • 5a Quibell M. Turnell WG. Johnson T. J. Chem. Soc., Perkin Trans. 1  1993,  2843 
  • 5b Limal D. Semetey V. Dalbon P. Jolivet M. Briand J.-P. Tetrahedron Lett.  1999,  40:  2749 
  • 6 Liley M. Johnson T. Tetrahedron Lett.  2000,  41:  3983 
  • For application of zinc as non-basic HCl scavenger for racemization free peptide coupling with Fmoc-amino acid chlorides, and for isolation of free amino acid methyl esters, see:
  • 7a Sureshbabu VV. Gopi HN. Tetrahedron Lett.  1998,  39:  9769 
  • 7b Ananda K. Sureshbabu VV. J. Peptide Res.  2001,  57:  223 
  • 8 Due to difficulty in the addition of a stoichiometric quantity of the tertiary amine, excess base can be transferred. Presence of excess base can also promote several other side reactions which are intrinsic to peptides as substrates. Bednarek MA. Bodanszky M. Int. J. Pept. Protein Res.  1995,  45:  64 ; and references cited therein
  • 10a Bodansky M. Principles of Peptide Synthesis   2nd ed.:  Springer; New York: 1993. 
  • 10b Bodansky M. Bodansky A. The Practice of Peptide Synthesis   2nd ed.:  Springer; New York: 1994. 
  • 12a

    An authentic sample of hydantoin was prepared from isocyanate 2a. To confirm the present protocol is free from hydantoin formation (see Supporting Information).

  • 12b Nefzi A. Ostresh JM. Giultanotti M. Houghten RA. Tetrahedron Lett.  1998,  39:  8199 
  • 13 Bohme H. Martin F. Strahl J. Arch. Pharm.  1980,  313:  10 
  • 14a Xu D.-Q. Yue H.-D. Luo S.-P. Xia A.-B. Zhang S. Xu Z.-Y. Org. Biomol. Chem.  2008,  6:  2054 
  • 14b Yoshihiro S. Tanatani A. Hashimoto Y. Nagasawa K. Chem. Pharm. Bull.  2004,  52:  477 
  • 15a Boeijen A. Liskamp RMJ. Eur. J. Org. Chem.  1999,  2127 
  • 15b Colacino E. Lamaty F. Martinez J. Parrot I. Tetrahedron Lett.  2007,  48:  5317 
  • 15c Boeijen A. Kruijttzer JAW. Liskamp RMJ. Bioorg. Med. Chem. Lett.  1998,  8:  2375 
  • 15d Fischer L. Semetey V. Lozano J.-M. Schaffner A.-P. Briand J.-P. Didierjean C. Guichard G. Eur. J. Org. Chem.  2007,  2511 
  • 15e Boeijen A. van Ameijde J. Liskamp RMJ. J. Org. Chem.  2001,  66:  8454 
9

Phosgene in toluene can be used in stoichiometric amounts, forms no byproducts and the unreacted portion, if any, can be completely removed simply through evaporation. On the other hand, other carbonylating agents including triphosgene and the byproducts they form have to be separated from isocyanates either through extraction with aqueous solvents or column chromatography, conditions that tend to reduce the yields of peptide ester isocyanate. Also, in case of phosgene the co-product of acylation, HCl, can be neutralized using non-basic reagent zinc without raising the pH of the medium. Consequently, we chose this reagent in spite of its known safety concerns.

11

HPLC was carried out on Agilent 1100 using an Agilent EcilpseXDB-C18 G1311A column (4.6 × 150 mm, 5 µm) and a gradient of 0.1% TFA in H2O-MeCN 30-90% in 30 min with spectrometric monitoring at λ = 215 nm. HPLC profile of the crude 3a showed a sharp single peak at
t R = 20.045 min with a purity of 95%.