Thromb Haemost 2002; 87(05): 846-853
DOI: 10.1055/s-0037-1613095
Review Article
Schattauer GmbH

Prothrombin G20210A is a Bifunctional Gene Polymorphism

Angela M. Carter
1   Academic Unit of Molecular Vascular Medicine, University of Leeds, United Kingdom
,
Mythily Sachchithananthan
2   Monash Department of Medicine, Box Hill, Victoria, Australia
,
Stan Stasinopoulos
2   Monash Department of Medicine, Box Hill, Victoria, Australia
,
Fabienne Maurer
3   Department of Medical Genetics, Central Hospital of the University of Vaud, Lausanne, Switzerland
,
Robert L. Medcalf
2   Monash Department of Medicine, Box Hill, Victoria, Australia
› Author Affiliations
Further Information

Publication History

Received 29 September 2001

Accepted 16 January 2002

Publication Date:
11 December 2017 (online)

Summary

The G20210A polymorphism has been shown to alter the efficiency of prothrombin mRNA processing. Here we show that the G20210A mutation also alters prothrombin mRNA stability. Three-fold more prothrombin protein and mRNA were produced in NIH-3T3 cells transfected with the prothrombin cDNAs containing the 20210A variant compared to cells expressing the 20210G variant. mRNA stability assays using chimeric globin transcripts harboring the G or A variant of the 97 nt prothrombin 3’-UTR indicated that the 20210G variant conferred greater instability to the globin reporter transcript than the A variant in transfected HepG2 cells. Both variants of the prothrombin 3’-UTR were shown to provide binding sites for a number of cellular proteins including HuR, an RNA binding protein associated with mRNA stability. Our results indicate that the G20210A is a bifunctional polymorphism, as it not only alters the efficiency of mRNA processing, but also the decay rate of prothrombin mRNA.

 
  • References

  • 1 Poort SR, Rosendaal FR, Reitsma PH, Bertina RM. A common genetic variation in the 3’-untranslated region of the prothrombin gene is associated with elevated plasma prothrombin levels and an increase in venous thrombosis. Blood 1996; 88: 3698-703.
  • 2 Souto JC, Coll I, Llobet D, del Rio E, Oliver A, Mateo J, Borrell M, Fontcuberta J. The prothrombin 20210A allele is the most prevalent genetic risk factor for venous thromboembolism in the Spanish population. Thromb Haemost 1988; 80: 366-9.
  • 3 Soria JM, Almasy L, Souto JC, Tirado I, Borell M, Mateo J, Slifer S, Stone W, Blangero J, Fontcuberta J. Linkage analysis demonstrates that the prothrombin G20210A mutation jointly influences plasma prothrombin levels and risk of thrombosis. Blood 2000; 95: 2780-5.
  • 4 Gehring NH, Frede U, Neu-Yilik G, Hundsdoerfer P, Vetter B, Hentze MW, Kulozik AE. Increased efficiency of mRNA 3’ end formation: a new genetic mechanism contributing to hereditary thrombophilia. Nat Genet 2001; 28: 389-92.
  • 5 Tierney MJ, Medcalf RL. Plasminogen Activator Inhibitor Type 2 Contains mRNA Instability Elements within Exon 4 of the Coding Region. sequence homology to coding region instability determinants in other mRNAs. J Biol Chem 2001; 276: 13675-84.
  • 6 Degen SJ, MacGillivray RT, Davie EW. Characterization of the complementary deoxyribonucleic acid and gene coding for human prothrombin. Biochemistry 1983; 22: 2087-97.
  • 7 Maurer F, Medcalf RL. Plasminogen activator inhibitor type 2 gene induction by tumor necrosis factor and phorbol ester involves transcriptional and post-transcriptional events. Identification of a functional nonameric AU-rich motif in the 3’-untranslated region. J Biol Chem 1996; 271: 26074-80.
  • 8 Chomczynski P, Sacchi N. Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal Biochem 1987; 162: 156-9.
  • 9 Medcalf RL, Ruegg M, Schleuning WD. A DNA motif related to the cAMP-responsive element and an exon-located activator protein-2 binding site in the human tissue-type plasminogen activator gene promoter cooperate in basal expression and convey activation by phorbol ester and cAMP. J Biol Chem 1990; 265: 14618-26.
  • 10 Haugland RA, Vesper SJ, Wymer LJ. Quantitative measurement of Stachybotrys chartarum conidia using real time detection of PCR products with the TaqMan(TM)fluorogenic probe system. Mol Cell Probes 1999; 13: 329-40.
  • 11 Maurer F, Tierney M, Medcalf RL. An AU-rich sequence in the 3’-UTR of plasminogen activator inhibitor type 2 (PAI-2) mRNA promotes PAI-2 mRNA decay and provides a binding site for nuclear HuR. Nucleic Acids Res 1999; 27: 1664-73.
  • 12 Bernstein P, Peltz SW, Ross J. The poly(A)-poly(A)-binding protein complex is a major determinant of mRNA stability in vitro. Mol Cell Biol 1989; 09: 659-70.
  • 13 Ford LP, Bagga PS, Wilusz J. The poly(A) tail inhibits the assembly of a 3’-to-5’ exonuclease in an in vitro RNA stability system. Mol Cell Biol 1997; 17: 398-406.
  • 14 Gao M, Fritz DT, Ford LP, Wilusz J. Interaction between a poly(A)-specific ribonuclease and the 5’ cap influences mRNA deadenylation rates in vitro. Mol Cell 2000; 05: 479-88.
  • 15 Gallie DR. A tale of two termini: a functional interaction between the termini of an mRNA is a prerequisite for efficient translation initiation. Gene 1998; 216: 1-11.
  • 16 Degen SJ. The prothrombin gene and its liver-specific expression. Semin Thromb Haemost 1992; 18: 230-42.
  • 17 Gorlach M, Burd CG, Dreyfuss G. The mRNA Poly(A)-binding protein: Localization, abundance and RNA binding specificity. Exp Cell Res 1994; 211: 400-7.
  • 18 Ross J. mRNA stability in mammalian cells. Microbiol Rev 1995; 59: 423-50.
  • 19 Brennan CM, Steitz JA. HuR and mRNA stability. Cell Mol Life Sci 2001; 58: 266-77.
  • 20 Ma WJ, Cheng S, Campbell C, Wright A, Furneaux H. Cloning and characterization of HuR, a ubiquitously expressed Elav-like protein. J Biol Chem 1996; 271: 8144-51.
  • 21 Levy NS, Chung S, Furneaux H, Levy AP. Hypoxic stabilization of vascular endothelial growth factor mRNA by the RNA-binding protein HuR. J Biol Chem 1998; 273: 6417-23.
  • 22 Fan XC, Steitz JA. Overexpression of HuR, a nuclear-cytoplasmic shuttling protein, increases the in vivo stability of ARE-containing mRNAs. EMBO J 1998; 17: 3448-60.