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Plant Biol (Stuttg) 2002; 4(1): 86-93
DOI: 10.1055/s-2002-20440
Original Paper
Georg Thieme Verlag Stuttgart ·New York

The Genus Clusia L.: Molecular Evidence for Independent Evolution of Photosynthetic Flexibility

A. Vaasen 1 , D. Begerow 1 , U. Lüttge 2 , R. Hampp 1
  • 1 Institute of Botany, University of Tübingen, Tübingen, Germany
  • 2 Institute of Botany, Darmstadt University of Technology, Darmstadt, Germany
Further Information

Publication History

October 10, 2001

November 13, 2001

Publication Date:
28 February 2002 (online)

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Abstract

Members of the Clusiaceae genus Clusia (tropical trees and shrubs) belong to the small group of dicotyledonous trees which are able to perform crassulacean acid metabolism (CAM). Most of the species are able to switch between C3 and CAM modes of photosynthesis and only a few are restricted to either C3 or CAM. In order to discover possible phylogenetic relationships with regard to the mode of photosynthesis, we investigated 17 species of the genus Clusia, and one species each of the Clusiaceae genera Oedematopus and Hypericum on the basis of internal transcribed spacer (ITS) sequences between the 18S and 26S coding regions of nuclear ribosomal DNA. Little length variation was detected in the ITS region of Clusia species. ITS1 sequences ranged from 255 to 260 bp and ITS2 sequences from 208 to 210 bp. Neighbour-joining and parsimony analyses of these sequences resulted in considerable differences in cluster formation when compared to a classification based on morphological characteristics. The molecular data also give no indication of a group-specific evolution of modes of photosynthesis, i.e., C3 and CAM. We thus conclude that CAM has evolved independently several times within the genus Clusia.

Abbreviations

CAM: crassulacean acid metabolism

EDTA: ethylenediamine tetraacetic acid

ITS: internal transcribed spacer

PAUP*: phylogenetic analysis using parsimony (*and other methods)

PCR: polymerase chain reaction

TAE: tris-glacial acetic acid-EDTA

Key words

Clusia - Clusiaceae - internal transcribed spacer (ITS) - ribosomal DNA - molecular phylogeny - crassulacean acid metabolism (CAM)

References

  • 01 Ainouche,  A.-K., and Bayer,  R. J.. (1999);  Phylogenetic relationships in Lupinus (Fabaceae: Papilionoideae) based on internal transcribed spacer sequences (ITS) of nuclear ribosomal DNA.  American Journal of Botany. 86 590-607
    Search in Google Scholar
  • 02 Alice,  L. A., and Campbell,  C. S.. (1999);  Phylogeny of Rubus (Rosaceae) based on nuclear ribosomal DNA internal transcribed spacer region sequences.  American Journal of Botany. 86 81-97
    Search in Google Scholar
  • 03 Baldwin,  B. G.. (1992);  Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: an example from the Compositae.  Molecular Phylogenetics and Evolution. 1 3-16
    Search in Google Scholar
  • 04 Baldwin,  B. G.. (1993);  Molecular phylogenetics of Calycadenia (Compositae) based on ITS sequences of nuclear ribosomal DNA: chromosomal and morphological evolution reexamined.  American Journal of Botany. 80 222-238
    Search in Google Scholar
  • 05 Baldwin,  B. G.,, Sanderson,  M. J.,, Porter,  J. M.,, Wojciechowski,  M. F.,, Campell,  C. S.,, and Donoghue,  M. J.. (1995);  The ITS region of nuclear ribosomal DNA: a valuable source of evidence on angiosperm phylogeny.  Annals of the Missouri Botanical Garden. 82 247-277
    Search in Google Scholar
  • 06 Ball,  E.,, Hann,  J.,, Kluge,  M.,, Lee,  H. S. J.,, Lüttge,  U.,, Orthen,  B.,, Popp,  M.,, Schmitt,  A.,, and Ting,  I. P.. (1991);  Ecophysiological comportment of the tropical CAM-tree Clusia in the field.  New Phytologist. 117 473-481
    Search in Google Scholar
  • 07 Bayer,  R. J.. (1996);  Phylogenetic relationships in Sarraceniaceae based on rbcL and ITS sequences.  Systematic Botany. 21 121-134
    Search in Google Scholar
  • 08 Bittrich,  V., and Amaral,  M. C. E.. (1996);  Flower morphology and pollination biology of some Clusia species from the Gran Sabana (Venezuela).  Kew Bulletin. 51 681-694
    Search in Google Scholar
  • 09 Borland,  A. M.,, Griffiths,  H.,, Maxwell,  C.,, Broadmeadow,  M. S. J.,, Griffiths,  N. M.,, and Barnes,  J. D.. (1992);  On the ecophysiology of the Clusiaceae in Trinidad: expression of CAM in Clusia minor L. during the transition from wet to dry season and characterization of three endemic species.  New Phytologist. 122 349-357
    Search in Google Scholar
  • 10 D'Arcy,  W. G.. (1980) Family 123, Vol. 67. Guttiferae, Flora of Panama, Part VI. Woodson, R. E. Jr. and Schery, R. W., eds. Annals of the Missouri Botanical Garden pp. 969-1043
    Search in Google Scholar
  • 11 Diaz,  M.,, Haag-Kerwer,  A.,, Wingfield,  R.,, Ball,  E.,, Olivares,  E.,, Grams,  T. E. E.,, Ziegler,  H.,, and Lüttge,  U.. (1996);  Relationships between carbon and hydrogen isotope ratios and nitrogen levels in leaves of Clusia species and two other Clusiaceae genera at various sites and different altitudes in Venezuela.  Trees. 10 351-358
    CrossrefPubMedSearch in Google Scholar
  • 12 Engler,  A.. (1858 - 1879) Guttiferae et Quiinaceae. Flora Brasiliensis, XII, pars. I. de Martius, C. F. P. and Eichler, A. G., eds. pp. 380 - 486
    Search in Google Scholar
  • 13 Francisco-Ortega,  J.,, Fuertes-Aguilar,  J.,, Gomez-Campo,  C.,, Santos-Guerra,  A.,, and Jansen,  R. K.. (1999);  Internal transcribed spacer sequence phylogeny of Crambe L. (Brassicaceae): molecular data reveal two old world disjunctions.  Molecular Phylogenetics and Evolution. 11 361-380
    CrossrefPubMedSearch in Google Scholar
  • 14 Franco,  A. C.,, Ball,  E.,, and Lüttge,  U.. (1992);  Differential effects of drought and light levels on accumulation of citric and malic acids during CAM in Clusia. .  Plant, Cell and Environment. 15 390-829
    PubMedSearch in Google Scholar
  • 15 Franco,  A. C.,, Olivares,  E.,, Ball,  E.,, Lüttge,  U.,, and Haag-Kerwer,  A.. (1994);  In situ studies of crassulacean acid metabolism in several sympatric species of tropical trees of the genus Clusia. .  New Phytologist. 126 203-211
    PubMedSearch in Google Scholar
  • 16 Grams,  T. E. E.,, Haag-Kerwer,  A.,, Olivares,  E.,, Bass,  E.,, Arndt,  S.,, Popp,  M.,, Medina,  E.,, and Lüttge,  U.. (1997);  Comparative measurements of chlorophyll a fluorescence, acid accumulation and gas exchange in exposed and shaded plants of Clusia minor L. and Clusia multiflora H. B. K. in the field.  Trees. 11 240-247
    CrossrefPubMedSearch in Google Scholar
  • 17 Grams,  T. E. E.,, Herzog,  B.,, and Lüttge,  U.. (1998);  Are there species in the genus Clusia with obligate C3-photosynthesis?.  Journal of Plant Physiology. 152 1-9
    PubMedSearch in Google Scholar
  • 18 Gustafsson,  M. G. H.. (2000);  Floral morphology and relationships of Clusia gundlachii with a discussion of floral organ identity and diversity in the genus Clusia. .  International Journal of Plant Sciences. 161 43-53
    CrossrefPubMedSearch in Google Scholar
  • 19 Haag-Kerwer,  A.,, Grams,  T. E. E.,, Olivares,  E.,, Ball,  E.,, Arndt,  S.,, Popp,  M.,, Medina,  E.,, and Lüttge,  U.. (1996);  Comparative measurements of gas-exchange, acid accumulation and chlorophyll a fluorescence of different species of Clusia showing C3 photosynthesis, or crassulacean acid metabolism, at the same field site in Venezuela.  New Phytologist. 134 215-226
    PubMedSearch in Google Scholar
  • 20 Hammel,  B. E.. (1986);  New species of Clusiaceae from Central America with notes on Clusia and synonymy in the tribe Clusieae. .  Selbyana. 9 112-120
    PubMedSearch in Google Scholar
  • 21 Hershkovitz,  M. A., and Lewis,  L. A.. (1996);  Deep-level diagnostic value of the rDNA-ITS region.  Molecular Biology and Evolution. 13 1276-1295
    PubMedSearch in Google Scholar
  • 22 Hershkovitz,  M. A., and Zimmer,  E. A.. (1996);  Conservation pattern in angiosperm rDNA ITS2 sequences.  Nucleic Acids Research. 24 2857-2867
    CrossrefPubMedSearch in Google Scholar
  • 23 Herzog,  B.,, Hoffmann,  S.,, Hartung,  W.,, and Lüttge,  U.. (1999);  Comparison of photosynthetic responses of the sympatric tropical C3 species Clusia multiflora H. B. K. and the C3-CAM intermediate species Clusia minor L. to irradiance and drought stress in a phytotron.  Plant Biology. 1 460-470
    PubMedSearch in Google Scholar
  • 24 Herzog,  B.,, Hübner,  C.,, Ball,  E.,, Bastos,  R. d. N.,, Franco,  A. C.,, Scarano,  F. R.,, and Lüttge,  U.. (1999);  Comparative study of the C3/CAM intermediate species Clusia parviflora Saldanha et Engl. and the obligate CAM species Clusia hilariana Schlecht. growing sympatrically exposed and shaded in the coastal restinga of Brazil.  Plant Biology. 1 453-459
    PubMedSearch in Google Scholar
  • 25 Jobes,  D. V., and Thien,  L. B.. (1997);  A conserved motif in the 5.8S ribosomal RNA (rRNA) gene is a useful diagnostic marker for plant internal transcribed spacer (ITS) sequences.  Plant Molecular Biology Reporter. 15 326-334
    CrossrefPubMedSearch in Google Scholar
  • 26 Käss,  E., and Wink,  M.. (1997);  Molecular phylogeny and phylogeography of Lupinus (Leguminosae) inferred from nucleotide sequences of the rbsL gene and ITS 1 + 2 regions of rDNA.  Plant Systematics and Evolution. 208 139-167
    CrossrefPubMedSearch in Google Scholar
  • 27 Kim,  K.-J., and Jansen,  R. K.. (1994);  Comparisons of phylogenetic hypotheses among different data sets in dwarf dandelions (Krigia, Asteraceae): Additional information from internal transcribed spacer sequences of nuclear ribosomal DNA.  Plant Systematics and Evolution. 190 157-185
    CrossrefPubMedSearch in Google Scholar
  • 28 Liu,  J.-S., and Schardl,  C. L.. (1994);  A conserved sequence in internal transcribed spacer 1 of plant nuclear rRNA genes.  Plant Molecular Biology. 26 775-778
    CrossrefPubMedSearch in Google Scholar
  • 29 Lüttge,  U.. (1991);  Clusia - Morphogenetische, physiologische und biochemische Strategien von Baumwürgern im tropischen Wald.  Naturwissenschaften. 78 49-58
    CrossrefPubMedSearch in Google Scholar
  • 30 Lüttge,  U.. (1999);  One morphotype, three physiotypes: sympatric species of Clusia with obligate C3 photosynthesis, obligate CAM and C3-CAM intermediate behaviour - Review.  Plant Biology. 1 138-148
    PubMedSearch in Google Scholar
  • 31 Lüttge,  U.. (2000);  Photosynthese-Physiotypen unter gleichen Morphotypen, Species und bei Klonen: Kann ökophysiologische Plastizität zur Entstehung von Diversität beitragen?.  Berichte der Reindhold Tüxen-Gesellschaft. 12 319-334
    PubMedSearch in Google Scholar
  • 32 Maguire,  B.. (1958) Guttiferae. The botany of the Guayana Highland III. Maguire, B. and Wurdack, J. J., eds. Memoirs of the New York Botanical Garden 10 Nr. 1 pp. 49-61
    Search in Google Scholar
  • 33 Maguire,  B.. (1961) Guttiferae. The botany of the Guayana Highland IV. (2). Maguire, B. and Wurdack, J. J., eds. Memoirs of the New York Botanical Garden 10 Nr. 4 pp. 21-32
    Search in Google Scholar
  • 34 Maguire,  B.. (1966);  The genus Clusia (Guttiferae) in Suriname.  Acta Botanica Neerlandica. 15 63-75
    PubMedSearch in Google Scholar
  • 35 Maguire,  B.. (1976);  Apomixis in the genus Clusia (Clusiaceae) - a preliminary report.  Taxon. 25 241-244
    PubMedSearch in Google Scholar
  • 36 Maguire,  B.. (1978);  Notes on the Clusiaceae - chiefly of Panama. II.  Phytologia. 38 203-214
    PubMedSearch in Google Scholar
  • 37 Maguire,  B.. (1979);  On the genus Clusia (Clusiaceae) in Mexico.  Taxon. 28 13-18
    PubMedSearch in Google Scholar
  • 38 Möller,  M., and Cronk,  Q. C. B.. (1997);  Origin and relationships of Saintpaulia (Gesneriaceae) based on ribosomal DNA internal transcribed spacer (ITS) sequences.  American Journal of Botany. 84 956-965
    PubMedSearch in Google Scholar
  • 39 Nogueira,  P. C. d. L.,, Bittrich,  V.,, Shepherd,  G. J.,, Lopes,  A. V.,, and Marsaioli,  A. J.. (2001);  The ecological and taxonomic importance of flower volatiles of Clusia species (Guttiferae).  Phytochemistry. 56 443-452
    CrossrefPubMedSearch in Google Scholar
  • 40 Pipoly,  J. J. I., and Graff,  A.. (1995);  A synopsis of the genus Clusia sections Criuvopsis and Brachystemon (Clusiaceae) in northern South America.  Sida. 16 505-528
    PubMedSearch in Google Scholar
  • 41 Pipoly,  J. J.,, Kearns,  D. M.,, and Berry,  P. E.. (1998) Clusia. . Flora of the Venezuelan Guayana, Vol. 4. Caesalpiniaceae-Ericaceae. Berry, P. E., Holst, B. K., and Yatskievych, K., eds. St. Louis, Missouri; Missouri Botanical Garden Press pp. 260-294
    Search in Google Scholar
  • 42 Planchon,  M. J.-E., and Triana,  J.. (1860);  Mémoire sur la famille des Guttifères.  Annales des Sciences Naturelles, Série 4, Botanique. 13 306-376
    PubMedSearch in Google Scholar
  • 43 Posada,  D., and Drandall,  K. A.. (1998);  Modeltest: testing the model of DNA substitution.  Bioinformatics. 9 817-818
    PubMedSearch in Google Scholar
  • 44 Raven,  J. A., and Spicer,  R. A.. (1996) The evolution of crassulacean acid metabolism. Crassulacean acid metabolism. Biochemisty, ecophysiology and evolution, Ecological Studies 114. Winter, K. and Smith, J. A. C., eds. Berlin, Heidelberg; Springer-Verlag pp. 360-385
    Search in Google Scholar
  • 45 Sage,  R. F.. (2001);  Environmental and evolutionary preconditions for the origin and diversification of the C4 photosynthetic syndrome.  Plant Biology. 3 202-213
    Thieme ConnectPubMedSearch in Google Scholar
  • 46 Sambrook,  J., and Russell,  D. W.. (2001) Molecular Cloning: a laboratory manual. 1. New York; Cold Spring Harbor
    Search in Google Scholar
  • 47 Sang,  T.,, Crawford,  D. J.,, Kim,  S.-C.,, and Stuessy,  T. F.. (1994);  Radiation of the endemic genus Dendroseris (Asteraceae) on the Juan Fernandez Islands: evidence from sequences of the ITS regions of nuclear ribosomal DNA.  American Journal of Botany. 81 1494-1501
    PubMedSearch in Google Scholar
  • 48 Sang,  T.,, Crawford,  D. J.,, and Stuessy,  T. F.. (1995);  Documentation of reticulate evolution in peonies (Paeonia) using internal transcribed spacer sequences of nuclear ribosomal DNA: implications for biogeography and concerted evolution.  Proceedings of the National Academy of Science of the United States of America. 92 6813-6817
    PubMedSearch in Google Scholar
  • 49 Standley,  P. C.. (1937);  Flora of Costa Rica.  (Publications of) Field Museum of Natural History - Botanical Series. 18 1-780
    PubMedSearch in Google Scholar
  • 50 Suh,  Y.,, Thien,  L. B.,, Reeve,  H. E.,, and Zimmer,  E. A.. (1993);  Molecular evolution and phylogenetic implications of internal transcribed spacer sequences of ribosomal DNA in Winteraceae.  American Journal of Botany. 80 1042-1055
    PubMedSearch in Google Scholar
  • 51 Susanna,  A.,, Garcia Jacas,  N.,, Soltis,  D. E.,, and Soltis,  P. S.. (1995);  Phylogenetic relationships in tribe Cardueae (Asteraceae) based on ITS sequences.  American Journal of Botany. 82 1056-1068
    PubMedSearch in Google Scholar
  • 52 Swofford,  D. L.. (1999) PAUP*. Phylogenetic analysis using parsimony (* and other methods). Version 4. Sunderland, Massachusetts; Sinauer Associates
    Search in Google Scholar
  • 53 Vesque,  J.. (1893) Guttiferae. Monographieae Phanerogamarum, Vol. 8. de Candolle, A. and de Candolle, C., eds. Paris; G. Masson
    Search in Google Scholar
  • 54 White,  T. J.,, Bruns,  T.,, Lee,  S.,, and Taylor,  J.. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: A guide to methods and applications. Innis, M. A., Gelfand, D. H., Sninsky, J. J., and White, T. J., eds. San Diego; Academic Press pp. 315-322
    Search in Google Scholar
  • 55 Willis,  J. C.. (1973) A dictionary of the flowering plants and ferns. Cambridge; University Press
    Search in Google Scholar
  • 56 Winter,  K., and Smith,  J. A. C.. (1996) Crassulacean acid metabolism. Biochemistry, ecophysiology and evolution. Ecological studies 114. Berlin, Heidelberg; Springer-Verlag pp. 449
    Search in Google Scholar
  • 57 Wojciechowski,  M. F.,, Sanderson,  M. J.,, Baldwin,  B. G.,, and Donoghue,  M. J.. (1993);  Monophyly of aneuploid Astragalus (Fabaceae): evidence from nuclear ribosomal DNA internal transcribed spacer sequences.  American Journal of Botany. 80 711-722
    PubMedSearch in Google Scholar
  • 58 Yang,  Y.-W.,, Lai,  K.-N.,, Tai,  P.-Y.,, Ma,  D.-P.,, and Li,  W.-H.. (1999);  Molecular phylogenetic studies of Brassica, Rorippa, Arabidopsis and allied genera based on the internal transcribed spacer region of 18S-25S rDNA.  Molecular Phylogenetics and Evolution. 13 455-462
    CrossrefPubMedSearch in Google Scholar
  • 59 Yuan,  Y.-M., and Küpfer,  P.. (1995);  Molecular phylogenetics of the subtribe Gentianinae (Gentianaceae) inferred from the sequences of internal transcribed spacers (ITS) of nuclear ribosomal DNA.  Plant Systematics and Evolution. 196 207-226
    CrossrefPubMedSearch in Google Scholar
  • 60 Zotz,  G., and Winter,  K.. (1993);  Short-term regulation of crassulacean acid metabolism activity in a tropical hemiepiphyte, Clusia uvitana. .  Plant Physiology. 102 835-841
    PubMedSearch in Google Scholar

A. Vaasen

Institute of Botany
University of Tübingen

72076 Tübingen
Germany

Email: anja.vaasen@uni-tuebingen.de

Section Editor: H. Rennenberg