Plant Biol (Stuttg) 2004; 6(4): 370-374
DOI: 10.1055/s-2004-820890
Rapid Communication

Georg Thieme Verlag Stuttgart KG · New York

Pleiotropic Effects of the Arabidopsis Cryptochrome 2 Allelic Variation Underlie Fruit Trait-Related QTL

S. E. D. El-Assal1 , C. Alonso-Blanco2 , C. J. Hanhart1 , M. Koornneef1
  • 1Laboratory of Genetics, Graduate School Experimental Plant Science, Wageningen University, Wageningen, The Netherlands
  • 2Departamento de Biotecnología, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Carretera de A Coruña, Km 7, Madrid-28040, Spain
Further Information

Publication History

Publication Date:
12 July 2004 (online)

Abstract

The previous molecular identification of a flowering time QTL segregating in the Arabidopsis Ler × Cvi cross, demonstrated that natural allelic variation at the blue light photoreceptor CRY2 gene affects flowering time ([El-Assal et al., 2001]). In addition, previous works on the same cross have mapped several QTL affecting other unrelated life history traits in the CRY2 genomic region. In the present report, we have used a set of Arabidopsis Ler transgenic plants carrying four different functional CRY2 transgenes for phenotypic analyses, with the aim of exploring the extent of pleiotropy of CRY2 allelic variation. It is concluded that previously identified QTL affecting fruit length, ovule number per fruit, and percentage of unfertilized ovules are caused by this same Ler/Cvi CRY2 allelic variation. In addition, dose effects of the CRY2-Ler allele are detected for fruit length. A seed weight QTL at the map position of CRY2 could not be confirmed and also no effect on seed dormancy was observed. Thus, it is shown that transgenic plants carrying different alleles can be a useful tool to attribute QTL for different complex traits to a specific locus, even when the relationship among the traits has not been previously suggested.

References

  • 1 Alonso-Blanco C., Bentsink L., Blankestijn-De Vries H., Hanhart C. J., Koornneef M.. Analysis of natural allelic variation at seed dormancy loci of Arabidopsis thaliana. .  Genetics. (2003);  164 711-729
  • 2 Alonso-Blanco C., Blankestijn-De Vries H., Hanhart C. J., Koornneef M.. Natural allelic variation at seed size loci in relation to other life history traits of Arabidopsis thaliana. .  Proc. Natl. Acad. Sci. USA. (1999);  96 4710-4717
  • 3 Alonso-Blanco C., El-Assal S. E.-D., Coupland G., Koornneef M.. Analysis of natural allelic variation at flowering time loci in the Landsberg erecta and Cape Verde Island ecotypes of Arabidopsis thaliana. .  Genetics. (1998);  149 749-764
  • 5 Bentsink L., Alonso-Blanco C., Vreugdenhil D., Tesnier K. J. Y., Groot S. P. C., Koornneef M.. Genetic analysis of seed soluble oligosaccharides in relation to seed storability of Arabidopsis thaliana. .  Plant Physiol.. (2000);  124 1594-1603
  • 6 Bentsink L., Yuan K., Koornneef M., Vreugdenhil D.. The genetics of phytate and phosphate accumulation in seeds and leaves of Arabidopsis thaliana, using natural variation.  Theor. Appl. Genet.. (2003);  106 1234-1243
  • 7 Botto J. F., Alonso-Blanco C., Garzaron I., Sanchez R. A., Casal J. J.. The Cape Verde Islands allele of cryptochrome 2 enhances cotyledon unfolding in the absence of blue light in Arabidopsis. .  Plant Physiol.. (2003);  133 1547-1556
  • 8 Clark S. E.. Cell signalling at the shoot meristem.  Nat. Rev. Mol. Cell Biol.. (2001);  2 276-284
  • 9 Darvisi A., Pisanté-Shalom A.. Complexities in the genetic dissection of quantitative traits loci.  Trends in Genet.. (2002);  18 489-491
  • 10 El-Assal S. E.-D., Alonso-Blanco C., Peeters A. J. M., Raz V., Koornneef M.. The cloning of a flowering time QTL reveals a novel allele of CRY2. .  Nature Genetics. (2001);  29 435-440
  • 11 Glazier A. M., Nadeau J. H., Aitman T. J.. Finding genes that underlie complex traits.  Science. (2002);  298 2345-2349
  • 12 Koornneef M., Alonso-Blanco C., Vreugdenhil D.. Naturally occurring genetic variation in Arabidopsis thaliana. .  Ann. Rev. Plant Biol.. (2004);  55 141-172
  • 13 Lin C.. Blue light receptors and signal transduction.  Plant Cell. (2002);  14 s207-s225
  • 14 McKay J. K., Richards J. H., Mitchell-Olds T.. Genetics of drought adaptation in Arabidopsis thaliana: I. Pleiotropy contributes to genetic correlations among ecological traits.  Mol. Ecol.. (2003);  12 1137-1151
  • 15 Paran I., Zamir D.. Quantitative traits in plants: beyond the QTL.  Trends in Genetics. (2003);  19 303-306
  • 16 Swarup K., Alonso-Blanco C., Lynn J. R., Michaels S., Amasino R. M., Koornneef M., Millar A. J.. Natural allelic variation identifies new genes in the Arabidopsis circadian system.  Plant J.. (1999);  20 1-11
  • 17 Yano M.. Genetic and molecular dissection of naturally occurring variation.  Curr. Opion. Plant Biol.. (2001);  4 130-135

M. Koornneef

Laboratory of Genetics
Department of Plant Sciences
Wageningen University

Arboretumlaan 4

6703 BD Wageningen

The Netherlands

Email: maarten.koornneef@wur.nl

Section Editor: J. Schroeder