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DOI: 10.1055/s-2004-831200
Technical Scale Synthesis of a New and Highly Potent Thrombin Inhibitor
Publication History
Publication Date:
25 August 2004 (online)
Abstract
In this account, we describe the development of an efficient and convergent process for the peptidomimetic thrombin inhibitor 1 on production plant scale. Starting from nicotinonitrile (13), (2S,4R)-1-(tert-butoxycarbonyl)-4-hydroxy-2-pyrrolidinecarboxylic acid (5) and (2R)-2-amino-3-cyclohexylpropanoic acid (29) compound 1 was obtained in 16 chemical steps. New methods had been developed for the preparation of the key intermediate dehydroproline 22 and the transformation of nitriles into amidines. The thrombin inhibitor 1 was isolated by special techniques (nanofiltration and spray drying). Almost all salts of 1 are amorphous, however, a crystalline complex was obtained with 1,2-benzisothiazol-3(2H)-one 1,1-dioxide (Saccharin®).
Key words
amino acids - drugs - enantiomeric resolution - heterocycles - stereoselective synthesis
-
1a
Sorbera LA.Bayes M.Castaner J.Silvestre J. Drugs Future 2001, 12: 1155 -
1b
Pfau R. Curr. Opin. Drug Disc. 2003, 6: 437 -
1c
Sanderson PEJ.Stanton MG.Dorsey BD.Lyle TA.McDonough C.Sanders WM.Savage KL.Naylor-Olsen AM.Krueger JA.Lewis SD.Lucas BJ.Lynch JJ.Yan Y. Bioorg. Med. Chem. Lett. 2003, 13: 795 -
1d
Olsen JA.Banner DW.Seiler P.Obst Sander U.D’Arcy A.Stihle M.Müller K.Diederich F. Angew. Chem. Int. Ed. 2003, 42: 2507 -
1e
Nilsson JW.Kvarnström I.Musil D.Nilsson I.Samulesson B. J. Med. Chem. 2003, 46: 3985 - 2
Hemostasis and Thrombosis: Basic Principles and Clinical Practice
3rd ed.:
Colman RW.Hirsch J.Marder VJ.Salzman EW. Lippincott J. B.; Philadelphia: 1994. -
3a
Wiley MR.Fisher MJ. Exp. Opin. Ther. Patents 1997, 7: 1265 -
3b
Rewinkel JBM.Adang AEP. Curr. Pharm. Design 1999, 5: 1043 -
4a
Böhm H.-J,Hoeffken HW,Hornberger W,Koser S,Mack H,Pfeiffer T,Seitz W, andZierke T. inventors; World Patent 9625426. ; Chem. Abstr. 1996, 125, 301605 -
4b
Lange UEW.Baucke D.Hornberger W.Mack H.Seitz W.Höffken W. Bioorg. Med. Chem. Lett. 2003, 13: 2029 -
4c
Lange, U. E. W.; Baucke, D.; Hornberger, W.; Mack, H.; Seitz, W.; Höffken, W., manuscript in preparation.
- 6
Rüeger H.Benn MH. Can. J. Chem. 1982, 60: 2918 - 7
Barker PL.Gendler PL.Rapoport H. J. Org. Chem. 1981, 46: 2455 -
8a
Wissmann H.Kleiner H.-J. Angew. Chem., Int. Ed. Engl. 1980, 19: 133 ; Angew. Chem. 1980, 92, 129 -
8b
Wissmann H. Phosphorus and Sulfur 1987, 30: 645 -
8c
Escher R.Bünning P. Angew. Chem., Int. Ed. Engl. 1986, 25: 277 ; Angew. Chem. 1986, 98, 264 -
9a
Engbersen JFJ.Koudijs A.Joosten MHA.van der Plas HC. J. Heterocycl. Chem. 1986, 13: 989 -
9b
Takamizawa S.Wakasa N.Fuchikami T. Synlett 2001, 1623 -
9c
Bullock MW.Hand JJ.Stokstad ELR. J. Am. Chem. Soc. 1956, 78: 3693 -
9d
Atkins H.Wolff IA.Pavlic A.Hutchinson E. J. Am. Chem. Soc. 1944, 66: 1293 -
9e
Hilpert K.Ackermann J.Banner DW.Gast A.Gubernator K.Hadváry P.Labler L.Müller K.Schmid G.Tschopp TB.van der Waterbeemd H. J. Med. Chem. 1994, 37: 3889 - 10
Bouchet M.-J.Rendon A.Wermuth CG.Goeldner M.Hirth C. J. Med. Chem. 1987, 30: 2222 -
11a
Minisci F.Galli R. Tetrahedron Lett. 1965, 6: 433 -
11b
Minisci F. Synthesis 1973, 1 -
11c
Minisci F.Citterio A.Vismara E.Giordano C. Tetrahedron 1985, 41: 4157 - 12
Houssin R.Bernier J.-L.Hénichart J.-P. Synthesis 1988, 259 - 13
Donohoe TJ.Guyo PM. J. Org. Chem. 1996, 61: 7664 - 14
Harbuck JW.Rapoport H. J. Org. Chem. 1972, 37: 3618 - 15
Bailey DM.Johnson RE.Albertson NF. Org. Synth. 1971, 51: 100 - 16
Grehn L.Ragnarsson U. Angew. Chem. Int. Ed. Engl. 1984, 23: 296 ; Angew. Chem. 1984, 96, 291 - 17
Stürmer R.Schäfer B.Wolfart V.Stahr H.Kazmaier U.Helmchen G. Synthesis 2001, 46 -
18a
Dormay J.-R.Castro B.Chappuis G.Fritschi U.-S.Grogg P. Angew. Chem. Int. Ed. Engl. 1980, 19: 742 ; Angew. Chem. 1980, 92, 761 -
18b
Dormay J.-R. Synthesis 1982, 753 - 19
Pfeiffer T,Seitz W,Mack H,Zierke T,Balkenhohl F, andLange U. inventors; German Patent 19630082. ; Chem. Abstr. 1998, 128, 154380 - CAUTION! Thermal runaway reaction with NaH and DMF are known in literature:
-
20a
DeWall G. Chem. Eng. News 1982, 60(37): 5 -
20b
DeWall G. Chem. Eng. News 1982, 60(37): 43 -
20c
Buckley J.Webb RL.Laird T.Ward RJ. Chem. Eng. News 1982, 60(28): 5 -
20d
Bretherick L. Handbook of Reactive Chemical Hazards 4th ed.: Butterworth-Heinemann Ltd.; Boston: 1990. p.1181 -
21a
Jones MF. J. Chem. Soc., Perkin Trans. 1 1991, 2479 -
21b
Rapoport H. J. Org. Chem. 1994, 54: 394 -
22a
Pinner A. Ber. Dtsch. Chem. Ges. 1885, 18: 2845 -
22b
Stilz HU.Jablonka B.Just M.Knolle J.Paulus EF.Zoller G. J. Med. Chem. 1996, 39: 2118 - 23
Schaefer FC.Peters GA. J. Org. Chem. 1961, 26: 412 -
24a
Medwid JB. J. Med. Chem. 1990, 33: 1230 -
24b
Soula C.Marsura A.Luu-Duc C. J. Pharm. Belg. 1987, 42: 293 ; Chem. Abstr. 1988, 109, 109969 -
24c
Hullin RP.Miller J.Short WF. J. Org. Chem. 1947, 12: 394 -
24d
Thurkauf A. J. Labelled Compd. Radiopharm. 1997, 39: 123 -
24e
Garigipati RS. Tetrahedron Lett. 1990, 31: 1969 -
24f
Moss RA.Ma W.Merrer DC.Xue S. Tetrahedron Lett. 1995, 36: 8761 -
24g
Kirby JB.van Dantzig NA.Chang CK.Nocera DG. Tetrahedron Lett. 1995, 36: 3477 -
25a
Jendralla H.Seuring B.Herchen J.Kulitzscher B.Wunner J.Stüber W.Koschinsky R. Tetrahedron 1995, 51: 12047 -
25b
Judkins BD.Allen DG.Cook TA.Evans B.Sardharwalla TA. Synth. Commun. 1996, 26: 4351 -
25c
Bolton RE.Coote SJ.Finch H.Lowdon H.Pegg N.Vinader MV. Tetrahedron Lett. 1995, 36: 4471 - 26
Partridge MW.Short WF. J. Org. Chem. 1947, 12: 390 - 27
Lange UEW.Schäfer B.Baucke D.Buschmann E.Mack H. Tetrahedron Lett. 1999, 40: 7067 - 28
Moser H.Fliri A.Steiger A.Costello G.Schreiber J.Eschenmoser A. Helv. Chim. Acta 1986, 69: 1224 -
29a
Bergeron HJ.Niegard J.Dichs JB.Egli-Karmakka M.Frei J.Huxley-Tencer A.Peter HH. J. Med. Chem. 1991, 34: 2072 -
29b
Kwiatkowski S.Crocker PJ.Chavan AJ.Imai N.Haley BE.Watt DS. Tetrahedron Lett. 1990, 31: 2093 -
29c
Ehrler J.Farooq S. Synlett 1994, 702 - Reviews:
-
30a
Dalko PI.Moisan L. Angew. Chem. Int. Ed. 2001, 40: 3726 ; Angew. Chem. 2001, 113, 3840 -
30b
Jarvo ER.Miller SJ. Tetrahedron 2002, 58: 2481 - 31
Henecka H.Kurtz P. In Houben-Weyl Methoden der Organischen Chemie 4th ed., Vol. 8: Thieme; Stuttgart: 1952. p.703 -
33a
Razdan U.Shah VJ. J. Sci. Ind. Res. 2001, 60: 560 -
33b
Dijkstra HP.van Klink GPM.van Koten G. Acc. Chem. Res. 2002, 35: 798 - 34
Schäfer B,Harms G,Ascherl H, andKrei GA. inventors; World Patent 200068254. ; Chem. Abstr. 2000, 133, 366431 - 35
Schäfer B. inventors; European Patent 1054017. ; Chem. Abstr. 2000, 133, 366468
References
Lit. Ref. [4a] , Example 32 and 93.
32For ion exchange chromatography an acetate ion exchanger from BIO RAD was used: AG 1-X8 Resin, 100-200 mesh, acetate form (catalog-Nr.: 140-1443) Address: BIO RAD (BIO RAD laboratories, 2000 Alfred Nobel Dr., Hercules, CA 94547. Due to the water content (48%) before chromatography the ion exchanger was treated with an excess of anhyd MeOH. Based on the content of acetate more than two equivalents were used. The column should be thin and long. For ion exchange chromatography MeOH was used as the solvent.
36ICH Guideline Q7A: http://www.fda.gov/cder/guidance/1289dft.pdf.