Subscribe to RSS
DOI: 10.1055/s-0040-1719872
A Photoenzyme for Challenging Lactam Radical Cyclizations
Financial support is provided by the National Institutes of Health (NIH, R01 GM127703). This work made use of the Cornell University NMR Facility, which is supported, in part, by the NSF through MRI award CHE-1531632.
Abstract
Reductive radical cyclizations are ubiquitous in organic synthesis and have been applied to the synthesis of structurally complex molecules. N-Heterocyclic motifs can be prepared through the cyclization of α-haloamides; however, slow rotation around the amide C–N bond results in preferential formation of an acyclic hydrodehalogenated product. Here, we compare four different methods for preparing γ-, δ-, ε-, and ζ-lactams via radical cyclization. We found that a photoenzymatic method using flavin-dependent ‘ene’ reductases affords the highest level of product selectivity. We suggest that through selective binding of the cis-amide isomer, the enzyme preorganizes the substrate for cyclization, helping to avoid premature radical termination.
Supporting Information
- Supporting information for this article is available online at https://doi.org/10.1055/s-0040-1719872.
- Supporting Information
Publication History
Received: 16 November 2021
Accepted after revision: 10 December 2021
Article published online:
28 January 2022
© 2022. Thieme. All rights reserved
Georg Thieme Verlag KG
Rüdigerstraße 14, 70469 Stuttgart, Germany
-
References and Notes
- 1 Jasperse CP, Curran DP, Fevig TL. Chem. Rev. 1991; 91: 1237
- 2 Liao J, Yang X, Ouyang L, Lai Y, Huang J, Luo R. Org. Chem. Front. 2021; 8: 1345
- 3 Corsello MA, Kim J, Garg NK. Nat. Chem. 2017; 9: 944
- 4 Hung K, Hu X, Maimone TJ. Nat. Prod. Rep. 2018; 35: 174
- 5 Fantinati A, Zanirato V, Marchetti P, Trapella C. ChemistryOpen 2020; 9: 100
- 6a Song L, Fang X, Wang Z, Liu K, Li C. J. Org. Chem. 2016; 81: 2442
- 6b Brill ZG, Grover HK, Maimone TJ. Science 2016; 352: 1078
- 7 Clark AJ, Curran DP, Fox DJ, Ghelfi F, Guy CS, Hay B, James N, Phillips JM, Roncaglia F, Sellars PB, Wilson P, Zhang H. J. Org. Chem. 2016; 81: 5547
- 8a Stork G, Mook RJr, Biller SA, Rychnovsky SD. J. Am. Chem. Soc. 1983; 105: 3741
- 8b Ueno Y, Moriya O, Chino K, Watanbe M, Okawara M. J. Chem. Soc., Perkin Trans. 1 1986; 1351
- 8c Ueno Y, Chino K, Watanabe M, Moriya O, Okawara M. J. Am. Chem. Soc. 1982; 104: 5564
- 9 Curran DP, Tamine J. J. Org. Chem. 1991; 56: 2746
- 10 Frisch MJ, Trucks GW, Schlegel HB, Scuseria GE, Robb MA, Cheeseman JR, Scalmani G, Barone V, Petersson GA, Nakatsuji H, Li X, Caricato M, Marenich AV, Bloino J, Janesko BG, Gomperts R, Menucci B, Hratchian HP, Ortiz JV, Izmaylov AF, Sonnenberg JL, Williams-Young D, Ding F, Lipparini F, Egidi F, Goings J, Peng B, Petrone A, Henderson T, Ranasinghe D, Zakrzewski VG, Gao J, Rega N, Zheng G, Liang W, Hada M, Ehara M, Toyota K, Fukuda R, Hasegawa J, Ishida M, Nakajima T, Honda Y, Kitao O, Nakai H, Vreven T, Throssell K, Montgomery JA. Jr, Peralta JE, Ogliaro F, Bearpark MJ, Heyd JJ, Brothers EN, Kudin KN, Staroverov VN, Keith TA, Kobayashi R, Normand J, Raghavachari K, Rendell AP, Burant JC, Iyengar SS, Tomasi J, Cossi M, Millam JM, Klene M, Adamo C, Cammi R, Ochterski JW, Martin RL, Morokuma K, Farkas O, Foresman JB, Fox DJ. Gaussian 16, Revision C.01 . Gaussian Inc; Wallingford CT: 2019
- 11 Chai J.-D, Head-Gordon M. Phys. Chem. Chem. Phys. 2008; 10: 6615
- 12 Marenich AV, Cramer CJ, Truhlar DG. J. Phys. Chem. B 2009; 113: 6378
- 13 Sato T, Wada Y, Nishimoto M, Ishibashi H, Ikeda M. J. Chem. Soc. 1989; 879
- 14 Sato T, Chono N, Ishibashi H, Ikeda M. J. Chem. Soc., Perkin Trans. 1 1995; 1115
- 15 General Procedure for Organotin Method The procedure is adapted from Sato et al. and detailed below. The chloroamide starting material (0.224 mmol) was dissolved in dry benzene (4 mL). To a solution of Bu3SnH (1 equiv) and AIBN (9 mol%) in dry benzene (6 mL) was added via a syringe during 40 min under reflux, and the mixture was further refluxed for 12 h. After cooling, the solvent was evaporated off, and the residue was chromatographed on silica gel. The crude residue is purified using automated silica gel chromatography. Fractions containing product are combined and concentrated and weighed for isolated yield determination (5-exo-trig: 34% yield 2.8:1, hydrodehalogenation (HDH)/lactam). Yield was determined as a ratio of products. Product ratio was determined by NMR spectroscopy using the crude products. 5-exo-trig Substrate 21 1H NMR (500 MHz, CDCl3): δ = 7.38–7.28 (m, 5 H), 6.51 (t, J = 13 Hz, 1 H), 6.10–6.18 (m, 1 H), 4.17–4.14 (m, 2 H), 4.11 (s, 2 H), 3.04 (d, J = 30 Hz, 3 H). 13C NMR (126 MHz, CDCl3): δ = 166.73, 166.39, 152.98, 136.35, 135.83, 133.50, 132.63, 128.64, 127.90, 126.50, 123.45, 123.30, 52.20, 50.10, 41.43, 41.03, 35.02, 34.05. 5-exo-trig HDH 21 1H NMR (500 MHz, CDCl3): δ = 7.38–7.28 (m, 5 H), 6.51 (t, J = 13 Hz, 1 H), 6.10–6.18 (m, 1 H), 4.17–4.14 (m, 2 H), 4.11 (s, 2 H), 3.04 (d, J = 30 Hz, 3 H). 13C NMR (126 MHz, CDCl3): δ = 166.73, 166.39, 152.98, 136.35, 135.83, 133.50, 132.63, 128.64, 127.90, 126.50, 123.45, 123.30, 52.20, 50.10, 41.43, 41.03, 35.02, 34.05. 5-exo-trig Lactam 21 1H NMR 500 MHz, CDCl3): δ = 7.28 (t, J = 7 Hz, 2 H), 7.20 (t, J = 7 Hz, 1 H), 7.13 (d, 2 H), 3.27–3.23 (m, 2 H), 2.92 (s, 3 H), 2.62 (dd, J = 13, 6 Hz, 1 H), 2.59 (dd, J = 13, 6 Hz, 1 H), 2.46 (m, 1 H), 2.06 (m, 2 H), 1.86 (m, 1 H), 1.48 (m, 1 H). 13C NMR (126 MHz, CDCl3): δ = 169.55, 139.18, 128.89, 128.53, 126.30, 49.10, 42.02, 38.47, 35.24, 34.41, 28.56.
- 16 Kyne SH, Lévêque C, Zheng S, Fensterbank L, Jutand A, Olivier C. Tetrahedron 2016; 72: 7727
- 17 Ekomié A, Lefèvre G, Fensterbank L, Lacôte E, Malacria M, Ollivier C, Jutand A. Angew. Chem. Int. Ed. 2012; 51: 6942
- 18 General Procedure for Iron Hydride Method The procedure is adapted from Kyne et al. and detailed here. The FeCl2 (10 mol%) and NaBH4 (2 equiv) were added to a screw-cap tube in a glovebox. Acetonitrile (0.375 mL) was added under argon, and the mixture was stirred for 15 min at room temperature. A solution of chloroamide (0.224 mmol) in acetonitrile (0.125 mL) was added under argon. The reaction was sealed, removed from the glovebox, heated to 50 °C, and allowed to procced overnight. The reaction was cooled to room temperature, quenched with water, and the aqueous phase extracted with dichloromethane. The combined organic phase was washed with brine, dried with sodium sulfate, and the solvent removed in vacuo. The crude residue is purified using automated silica gel chromatography. Fractions containing product are combined and concentrated and weighed for isolated yield determination (5-exo-trig 30%, 95:5 HDH/lactam).
- 19a Fava E, Nakajima M, Tabak MB, Rueping M. Green Chem. 2016; 18: 4531
- 19b Darwent B. deB. Bond Dissociation Energies in Simple Molecules 1970; 31
- 20 General Procedure for Photoredox Method The photocatalytic method is adapted from Fava et al. and detailed below. An 8 dram vial was charged with chloroamide (0.25 mmol 1 equiv), Ir(ppy)2(dtb-bpy)PF6 (PC, 1 mol%), and Bu3N (2 equiv) under nitrogen in a glovebox. Degassed acetonitrile (12.5 mL, 0.02 M) was added and the reaction sealed. The reaction was then removed from the glovebox and irradiated with a 450 nm Kessil Lamp for 48 h. After this period, the mixture was diluted with Et2O, and the organic phase was extracted three times with brine, dried over MgSO4, filtered, and evaporated under reduce pressure. The crude residue is purified using automated silica gel chromatography. Fractions containing product are combined and concentrated and weighed for isolated yield determination (5-exo-trig 42%, 1:1.6 HDH/lactam).
- 21 Biegasiewicz KF, Cooper SJ, Gao X, Oblinsky DG, Kim JH, Garfinkle SE, Joyce LA, Sandoval BA, Scholes GD, Hyster TK. Science 2019; 364: 1166
- 22 Ye Y, Fu H, Hyster TK. J. Ind. Microbiol. Biotechnol. 2021; 48: kuab021 DOI: 10.1093/jimb/kuab021.
- 23 Page CG, Cooper SJ, DeHovitz JS, Oblinsky DG, Biegasiewicz KF, Antropow AH, Armbrust KW, Ellis JM, Hamann LG, Horn EJ, Oberg KM, Scholes GD, Hyster TK. J. Am. Chem. Soc. 2020; 143: 97
- 24 Gao X, Turek-Herman J, Choi YJ, Cohen R, Hyster T. J. Am. Chem. Soc. 2021; 143: 19643
- 25 Fu H, Lam H, Emmanuel MA, Kim JH, Sandoval BA, Hyster TK. J. Am. Chem. Soc. 2021; 143: 9622
- 26 Grosheva D, Hyster TK. Flavin-Based Catal. 2021; 291
- 27 Sandoval BA, Clayman PD, Oblinsky DG, Oh S, Nakano Y, Bird M, Scholes GD, Hyster TK. J. Am. Chem. Soc. 2020; 143: 1735
- 28 Clayman PD, Hyster TK. J. Am. Chem. Soc. 2020; 142: 15673
- 29 Nicholls BT, Oblinsky DG, Kurtoic SI, Grosheva D, Ye Y, Scholes GD, Hyster TK. Angew. Chem. Int. Ed. 2022; 61: e202113842 DOI: 10.1002/anie.202113842.
- 30 General Procedure for Photoenzymatic Method The method is adapted from Biegasiewicz et al. and detailed here. All reactions are run with 0.224 mmol of chloroamide starting material. Solid d-glucose (6 equiv) and GDH-105 lyophilized lysate (0.2 mg lysate/mg of starting material) are weighed out into a 25 mL round-bottom flask equipped with a magnetic stir bar. This, along with thoroughly degassed reaction buffer (100 mM KPi, pH = 8, 10% v/v glycerol) and the weighed-out starting material are taken into a Coy® anaerobic chamber. Reaction buffer, NADP+ (made as a 5 mg/mL solution in reaction buffer, 1 mol%), and purified GluER T36A W66A solution (1 mol%) are added such that the final liquid volume added (12.5 mL) creates a reaction mixture with a starting-material concentration of 17.92 mM. Starting material is dissolved in degassed THF cosolvent (2 μL/mg of starting material). This solution is taken up and pipetted directly into the reaction flask. The reaction flask is capped and sealed with a rubber septum and taken out of the anaerobic chamber where it is placed to stir at 400 rpm with fan cooling the reaction setup under nitrogen atmosphere irradiated with cyan light (50 W Chanzon high power LED chip, λmax = 490 nm, measured photon flux = 12,000 mM/m2s) for 36 h. Workup is performed as follows: the contents of the reaction flask are poured into a 125 mL Erlenmeyer flask containing 50 mL of 1 M aqueous hydrochloric acid and 50 mL of dichloromethane. This is stirred vigorously for 45 min, after which time the biphasic mixture is filtered through a thick pad of Celite® to remove precipitated material. The filtrate is poured into a separatory funnel, and the dichloromethane layer is collected. The aqueous layer is extracted with dichloromethane (2 × 50 mL), and the combined organic layers are dried with anhydrous sodium sulfate and concentrated. Fractions containing product are combined and concentrated and weighed for isolated yield determination (5-exo-trig 82%, 5:95 HDH/lactam).
- 31 Smith TW, Butler GB. J. Org. Chem. 1978; 43: 6
- 32 6-exo-trig Results Yield determined as a ratio of products. Product ratio was determined by NMR spectroscopy using the crude products. Organotin (45%, 64:36 HD/lactam), iron hydride (53%, 83:17), photoredox (66:34), photoenzymatic (72%, 5:95). 6-exo Substrate21 1H NMR 500 MHz, CDCl3): δ = 7.34–7.27 (m, 4 H), 7.24–7.18 (m, 1 H), 6.40 (t, J = 15 Hz 1 H), 6.14 (m, 1 H), 4.07 (d, J = 11 Hz, 2 H), 3.51 (m, 2 H), 3.05 (d, J = 35 Hz, 3 H), 2.45 (m, 2 H). 13C NMR (126 MHz, CDCl3): δ = 166.41, 137.28, 136.75, 133.30, 132.32, 128.63, 128.55, 127.66, 127.26, 126.53, 126.11, 125.00, 50.28, 48.25, 41.46, 40.94, 36.16, 33.84, 32.06, 30.90. 6-exo HDH 1H NMR (400 MHz, CDCl3): δ = 7.28 (m, 4 H), 7.12 (m, 1 H), 6.38 (dd, J = 15, 11 Hz, 1 H), 6.09 (m, 1 H), 3.40 (dt, J = 33, 9 Hz, 2 H), 2.90 (d, J = 19 Hz, 3 H), 2.40 (m, 2 H), 2.00 (d, J = 16 Hz, 3 H). 13C NMR (126 MHz, CDCl3): δ = 171.14, 137.43, 136.96, 132.78, 131.85, 128.62, 128.53, 127.49, 127.15, 126.06, 125.63, 50.73, 47.42, 36.56, 33.40, 32.77, 32.06, 31.25, 21.88, 21.39. IR: 3024, 2931, 1621, 1492, 1400, 1359, 1260, 1198, 1030, 966, 743, 589 cm–1. HRMS: m/z [M + 1] calcd: 204.1382; found: 204.138. 6-exo Lactam21 1H NMR (500 MHz, CDCl3): δ = 7.28 (t, J = 7 Hz, 2 H), 7.20 (t, J = 7 Hz, 1 H), 7.13 (d, 2 H), 3.27–3.23 (m, 2 H), 2.92 (s, 3 H), 2.62 (dd, J = 13, 6 Hz, 1 H), 2.59 (dd, J = 13, 6 Hz, 1 H), 2.46 (m, 1 H), 2.06 (m, 2 H), 1.86 (m, 1 H), 1.48 (m, 1 H). 13C NMR (126 MHz, CDCl3): δ = 169.55, 139.18, 128.89, 128.53, 126.30, 49.10, 42.02, 38.47, 35.24, 34.41, 28.56.
- 33 7-exo-trig Results Yield determined as a ratio of products. Product ratio was determined by NMR spectroscopy using the crude products. Organotin (55%, 72:28 HD/lactam), iron hydride (79%, 95:5), photoredox (31%, 47:53), photoenzymatic (73%, 5:95). 7-exo Substrate21 1H NMR (500 MHz, CDCl3): δ = 7.36–7.36 (m, 4 H), 7.25–7.17 (m, 1 H), 6.39 (t, J = 14 Hz, 1 H), 6.19 (m, 1 H), 4.07 (d, J = 6.2 Hz, 2 H), 3.41 (dt, J = 24, 6 Hz, 2 H), 3.03 (d, J = 53.3 Hz, 3 H), 2.26 (m, 2 H), 1.87–1.66 (m, 2 H). 13C NMR (126 MHz, CDCl3): δ = 166.44, 137.55, 137.17, 131.37, 130.58, 129.52, 128.52, 127.32, 127.03, 125.99, 49.80, 48.04, 41.49, 40.93, 35.72, 33.72, 27.94, 26.59. 7-exo HDH 1H NMR (400 MHz, CDCl3): δ = 7.30 (m, 4 H), 7.21 (m, 1 H), 6.40 (m, 1 H), 6.20 (m, 1 H), 3.36 (dt J = 8, 40 Hz, 2 H), 2.97 (d, J = 24 Hz, 3 H), 2.23 (p, J = 7 Hz, 2 H), 2.08 (d, J = 7 Hz, 3 H), 1.73 (m, 2 H). 13C NMR (126 MHz, CDCl3): δ = 170.50, 137.66, 137.29, 131.12, 130.34, 129.86, 128.89, 128.60, 128.50, 127.24, 126.95, 125.99, 50.27, 47.21, 36.20, 33.23, 30.36, 30.00, 27.90, 27.00, 21.99, 21.30. IR: 2928, 1637, 1490, 1433, 1397, 1012, 964, 743, 692, 601 cm–1. HRMS: m/z [M + 1] calcd: 218.1539; found: 218.1537. 7-exo Lactam21 1H NMR (500 MHz, CDCl3): δ = 7.27 (t, J = 7 Hz, 2 H), 7.19 (t, J = 7 Hz, 1 H), 7.15 (d, J = 7 Hz, 2 H), 3.46 (dd, J = 14, 11 Hz, 1 H), 3.20 (dd, J = 15, 6 Hz, 1 H), 2.97 (s, 3 H), 2.72 (dd, J = 13, 5 Hz, 1 H), 2.56–2.44 (m, 3 H), 1.93 (m, 1 H), 1.79 (m, 2 H), 1.46 (m, 1 H), 1.28 (m, 1 H). 13C NMR (126 MHz, CDCl3): δ = 174.38, 139.91, 129.41, 128.29, 125.86, 51.24, 43.12, 36.19, 35.25, 26.93.
- 34 8-exo-trig Results Yield determined as a ratio of products. Product ratio was determined by NMR spectroscopy using the crude products. Organotin (43%, 95:5 HD:lactam), iron hydride (70%, 95:5), photoredox (34%, 95:5), photoenzymatic (64%, 66:34). 8-exo-trig Substrate 1H NMR 400 MHz, CDCl3): δ = 7.1 (m, 4 H), 7.20 (m, 1 H), 6.38 (m, 1 H), 6.19 (m, 1 H), 4.06 (s, 2 H), 3.37 (dt, J = 8, 25 Hz, 2 H), 3.01 (dd, J = 9, 43 Hz, 3 H), 2.26 (p, J = 7 Hz, 2 H), 1.57 (m, 4 H). 13C NMR (126 MHz, CDCl3): δ = 169.48, 166.71, 137.43, 131.40, 130.77, 130.32, 129.61, 128.51, 127.04, 126.93, 125.71, 50.35, 48.23, 41.35, 40.77, 35.65, 33.81, 32.56, 27.89, 26.34. IR: 2931, 1742, 1648, 1617, 1446, 1405, 965, 744, 693 cm–1. HRMS: m/z [M + 1] calcd: 266.1306; found: 266.1299. 8-exo-trig HDH 1H NMR (400 MHz, CDCl3): δ = 7.33 (m, 4 H), 7.19 (m, 1 H), 6.38 (dd, J = 6, 16 Hz, 1 H), 6.20 (m, 1 H), 3.34 (dt, J = 8, 40 Hz, 2 H), 2.93 (dd, J = 8, 24 Hz, 3 H), 2.25 (p, J = 7 Hz, 2 H), 2.09 (d, J = 6 Hz, 3 H), 1.49 (m, 4 H). 13C NMR (126 MHz, CDCl3): δ = 170.40, 137.66, 137.29, 131.12, 130.34, 128.50, 126.95, 125.98, 50.26, 47.21, 36.20, 33.23, 30.36, 30.00, 27.90, 26.93, 21.99, 21.29. IR: 3023, 2829, 2856, 1637, 1491, 1433, 1397, 1184, 964, 743, 602, 468 cm–1. HRMS: m/z [M + 1] calcd: 232.1695; found: 232.1689. 8-exo-trig Lactam 1H NMR (400 MHz, CDCl3): δ = 7.29 (m, 2 H), 7.22 (m, 3 H), 3.68 (m, 1 H), 3.29 (dt, J = 4, 48 Hz, 1 H), 2.94 (s, 3 H), 2.75 (dd, J = 7, 13 Hz, 1 H), 2.50 (m, 3 H), 2.16 (m, 1 H), 1.75 (m, 3 H), 1.51 (m, 1 H), 1.18 (m, 2 H). 13C NMR (126 MHz, CDCl3): δ = 174.09, 161.27, 140.32, 129.33, 128.29, 126.03, 49.17, 43.14, 41.36, 38.92, 33.28, 28.41, 21.88. IR: 2922, 1634, 1453, 1423, 1396, 1236, 1137, 764, 527, 432 cm–1. HRMS: m/z [M + 1] calcd: 232.1695; found: 232.1692.